RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 CST9LQ9H4G1 147 aa6.69□□□□□ -1.34
HDAC3-202ENST00000459727 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
HDAC3-202ENST00000459727 ZFHX3Q15911 3703 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 CSMD1Q96PZ7 3565 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 TRBV25-1A0A075B6N4 114 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV3OR16-10A0A075B7F0 116 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV4-30-2A0A087WSY4 118 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 TRBV6-5A0A0K0K1A5 114 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 ELANEP08246 267 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 MGPP08493 103 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 PRB4P10163 310 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-202ENST00000459727 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-202ENST00000459727 PSMB8P28062 276 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 OCIAD2Q56VL3 154 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 PRR9Q5T870 116 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 UFSP1Q6NVU6 142 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 CEND1Q8N111 149 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 TEX29Q8N6K0 151 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 RASL10AQ92737 203 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 TMEM160Q9NX00 188 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
HDAC3-202ENST00000459727 PCNX1Q96RV3 2341 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 ITPR2Q14571 2701 aa6.68□□□□□ -1.34
HDAC3-202ENST00000459727 USP9YO00507 2555 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-202ENST00000459727 TRAV2A0A0B4J234 112 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 TRAV8-6A0A0B4J262 113 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 VCYO14598 125 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 IGHV3-11P01762 117 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 RNASE3P12724 160 aaKnown RBP6.67□□□□□ -1.34
HDAC3-202ENST00000459727 GCSHP23434 173 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 FXYD7P58549 80 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 C2orf66Q6UXQ4 117 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 C14orf178Q8N769 122 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-202ENST00000459727 RNF152Q8N8N0 203 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 NEXN-AS1Q8NBZ9 246 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 LINC00527Q9UJ94 153 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 FBN2P35556 2912 aa6.67□□□□□ -1.34
HDAC3-202ENST00000459727 ABCA12Q86UK0 2595 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
HDAC3-202ENST00000459727 LRBAP50851 2863 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 TRAV26-2A0A0B4J265 109 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 E9PLD3 99 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 H3BUT2 72 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 RBX1P62877 108 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 RHOHQ15669 191 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 LYRM7Q5U5X0 104 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 Q6ZVH6 145 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 GTSCR1Q86UQ5 136 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 DCANP1Q8TF63 244 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 KLK15Q9H2R5 256 aa6.66□□□□□ -1.34
HDAC3-202ENST00000459727 DOPEY1Q5JWR5 2465 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 LGALS1P09382 135 aaKnown RBP6.65□□□□□ -1.34
HDAC3-202ENST00000459727 BLCAPP62952 87 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 SCGB2A2Q13296 93 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 PIK3CD-AS1Q5SR53 167 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 FOXI2Q6ZQN5 318 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 RNASE8Q8TDE3 154 aaKnown RBP6.65□□□□□ -1.34
HDAC3-202ENST00000459727 BAALCQ8WXS3 180 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 C9orf85Q96MD7 179 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 JMJD8Q96S16 334 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 CSTL1Q9H114 145 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 VPREB3Q9UKI3 123 aa6.65□□□□□ -1.34
HDAC3-202ENST00000459727 IGKV2D-26A0A0A0MRZ7 120 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 A0A0J9YX75 114 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 J3QR89 54 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 K7EQG2 157 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 PRB1P04280 392 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 CD7P09564 240 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 RIPPLY3P57055 190 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 PMVKQ15126 192 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 TRPT1Q86TN4 253 aaKnown RBP6.64□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 UBE2E2Q96LR5 201 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 KIF25-AS1Q9Y6Z4 181 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 DNHD1Q96M86 4753 aa6.64□□□□□ -1.35
HDAC3-202ENST00000459727 TLN1Q9Y490 2541 aaKnown RBP6.64□□□□□ -1.35
HDAC3-202ENST00000459727 TRBV27A0A0K0K1C4 114 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 A0A1B0GWB2 263 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 J3KRW8 73 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 COX6B1P14854 86 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
HDAC3-202ENST00000459727 CENPEQ02224 2701 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 VPS25Q9BRG1 176 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
HDAC3-202ENST00000459727 IGHV1OR15-1A0A075B7D0 117 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms