RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TEX48A0A1B0GUV7 120 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 A8MTW9 85 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 RHODO00212 210 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 CTRLP40313 264 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZNF56Q15929 161 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZNF124Q15973 351 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 PIK3CD-AS1Q5SR53 167 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 ORMDL3Q8N138 153 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 SPATA3Q8NHX4 192 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 GTSF1Q8WW33 167 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 TMEM191AQ9H0A3 160 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 LAMTOR2Q9Y2Q5 125 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 ASH1LQ9NR48 2969 aaKnown RBP4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 HIVEP1P15822 2718 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 MUC21A0A0G2JKD1 596 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 MUC21A0A140T8X8 626 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 SNAI2O43623 268 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 IGLC6P0CF74 106 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 AZU1P20160 251 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 PMCHP20382 165 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 LGALS9BQ3B8N2 356 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 FAM74A4Q5TZK3 123 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 TMEM136Q6ZRR5 245 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 Q6ZWC4 215 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 OR4C5Q8NGB2 326 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 MRAP2Q96G30 205 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 PRELID3AQ96N28 172 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 SSBP4Q9BWG4 385 aaPredicted RBP4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 SAMD10Q9BYL1 202 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 MAP1LC3AQ9H492 121 aa4.29□□□□□ -1.72
RNU1-88P-201ENST00000459274 IGHV4-4A0A075B6R2 117 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 TRGV1A0A0A0MS02 117 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 IGHV3-16A0A0C4DH30 117 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 TCAPO15273 167 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 SPRY2O43597 315 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 HSBP1O75506 76 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 IGHV4-30-4P0DP06 118 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 MIFP14174 115 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 SRIP30626 198 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 EGFEM1PQ0D2K5 195 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 PRR9Q5T870 116 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 FAM104BQ5XKR9 115 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 C14orf178Q8N769 122 aaPredicted RBP4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 OR11H2Q8NH07 326 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 OR10AG1Q8NH19 301 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 TMEM18Q96B42 140 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZMAT4Q9H898 229 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 NXT2Q9NPJ8 142 aaKnown RBP4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 TNFRSF18Q9Y5U5 241 aa4.28□□□□□ -1.72
RNU1-88P-201ENST00000459274 CSMD2Q7Z408 3487 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 NSD1Q96L73 2696 aaPredicted RBP4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 LINC01549A6NIU2 74 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 PHOX2AO14813 284 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 CRXO43186 299 aaPredicted RBP4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 RNASE3P12724 160 aaKnown RBP4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 RAB4AP20338 218 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 EVI2AP22794 236 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 EMP1P54849 157 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 SMAGPQ0VAQ4 97 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 SLAQ13239 276 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 KIR3DS1Q14943 382 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 KIAA1644Q3SXP7 199 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 DMRTA1Q5VZB9 504 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 RNASEKQ6P5S7 137 aaKnown RBP4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 AMN1Q8IY45 258 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 PTH2Q96A98 100 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 C9orf85Q96MD7 179 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 YPEL4Q96NS1 127 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 PRADC1Q9BSG0 188 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 ST20Q9HBF5 79 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 MDFICQ9P1T7 246 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
RNU1-88P-201ENST00000459274 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 LYRM9A8MSI8 78 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 A8MZ25 164 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 D6R8Y8 96 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 K7EMI3 77 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 LINC00614P0C842 121 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 FCER1GP30273 86 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 AKR1D1P51857 326 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 DAD1P61803 113 aa4.26□□□□□ -1.73
RNU1-88P-201ENST00000459274 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms