RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 EMP1P54849 157 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 SUMO2P61956 95 aaKnown RBP10.67□□□□□ -0.7
SCFD1-203ENST00000458591 OR10J6PQ8NGY7 276 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 OR11H12B2RN74 326 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 F8VRH5 84 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 H3BUX3 64 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
SCFD1-203ENST00000458591 GNLYP22749 145 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 TMEM95Q3KNT9 176 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 OR11H1Q8NG94 326 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
SCFD1-203ENST00000458591 AGRNO00468 2067 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 LINC01619G3V211 115 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 SCGB1A1P11684 91 aa10.66□□□□□ -0.7
SCFD1-203ENST00000458591 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
SCFD1-203ENST00000458591 FAM223BA6NKX1 122 aa10.65□□□□□ -0.7
SCFD1-203ENST00000458591 ASIPP42127 132 aa10.65□□□□□ -0.7
SCFD1-203ENST00000458591 UCNP55089 124 aa10.65□□□□□ -0.7
SCFD1-203ENST00000458591 FAM223AQ8IWN6 122 aa10.65□□□□□ -0.7
SCFD1-203ENST00000458591 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
SCFD1-203ENST00000458591 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-203ENST00000458591 SLC25A16P16260 332 aa10.65□□□□□ -0.71
SCFD1-203ENST00000458591 SIGMAR1Q99720 223 aa10.65□□□□□ -0.71
SCFD1-203ENST00000458591 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.71
SCFD1-203ENST00000458591 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.71
SCFD1-203ENST00000458591 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 BAALCQ8WXS3 180 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 TOMM6Q96B49 74 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 CYSLTR1Q9Y271 337 aa10.64□□□□□ -0.71
SCFD1-203ENST00000458591 NDUFA4O00483 81 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
SCFD1-203ENST00000458591 C10orf99Q6UWK7 81 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 A0A087WWL8 130 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 H3BMG7 143 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 WFDC2Q14508 124 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 CD300EQ496F6 205 aaPredicted RBP10.63□□□□□ -0.71
SCFD1-203ENST00000458591 MUC4Q99102 2169 aa10.63□□□□□ -0.71
SCFD1-203ENST00000458591 OVOL1O14753 267 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 IGKV3-20P01619 116 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 AZU1P20160 251 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 GAGE13Q4V321 117 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 KLHL30-AS1Q8NEE0 82 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 PLEKHB2Q96CS7 222 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-203ENST00000458591 CIDEAO60543 219 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 FAM19A4Q96LR4 140 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 GTSF1LQ9H1H1 148 aa10.62□□□□□ -0.71
SCFD1-203ENST00000458591 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.719e-7■■■■■ 35.8
SCFD1-203ENST00000458591 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 AVPP01185 164 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 TSHBP01222 138 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
SCFD1-203ENST00000458591 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
SCFD1-203ENST00000458591 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 CFAP46Q8IYW2 2715 aa10.61□□□□□ -0.71
SCFD1-203ENST00000458591 CRYGDP07320 174 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 LINC00315P59091 139 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 FLNCQ14315 2725 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 CSPG4Q6UVK1 2322 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 IGHV4-30-2A0A087WSY4 118 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 TRAV12-3A0A0B4J271 114 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 A6NJY4 79 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 IGHG2P01859 326 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 CRIP2P52943 208 aaPredicted RBP10.6□□□□□ -0.71
SCFD1-203ENST00000458591 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
SCFD1-203ENST00000458591 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
SCFD1-203ENST00000458591 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
SCFD1-203ENST00000458591 SPATA25Q9BR10 227 aa10.59□□□□□ -0.71
SCFD1-203ENST00000458591 KIF25-AS1Q9Y6Z4 181 aa10.59□□□□□ -0.71
SCFD1-203ENST00000458591 A6NDX4 124 aa10.59□□□□□ -0.71
SCFD1-203ENST00000458591 HOXA3O43365 443 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-203ENST00000458591 NRGNQ92686 78 aa10.59□□□□□ -0.71
SCFD1-203ENST00000458591 PPP1R17O96001 155 aa10.58□□□□□ -0.72
SCFD1-203ENST00000458591 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
SCFD1-203ENST00000458591 SUMO4Q6EEV6 95 aa10.58□□□□□ -0.72
SCFD1-203ENST00000458591 SPAG8Q99932 426 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-203ENST00000458591 TP53TG1Q9Y2A0 90 aa10.58□□□□□ -0.72
SCFD1-203ENST00000458591 ZANQ9Y493 2812 aa10.57□□□□□ -0.72
SCFD1-203ENST00000458591 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
SCFD1-203ENST00000458591 F5H697 171 aa10.57□□□□□ -0.72
SCFD1-203ENST00000458591 CD7P09564 240 aa10.57□□□□□ -0.72
SCFD1-203ENST00000458591 ATP6V0BQ99437 205 aa10.57□□□□□ -0.72
SCFD1-203ENST00000458591 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-203ENST00000458591 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
SCFD1-203ENST00000458591 PRO0461Q9UI25 63 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms