RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 HAMPP81172 84 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 IFITM3Q01628 133 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 TOR2AQ5JU69 321 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 SAPCD1Q5SSQ6 148 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 ZFP2Q6ZN57 461 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 OR2G3Q8NGZ4 309 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 SGK494Q96LW2 274 aa14.32□□□□□ -0.12
CPNE1-220ENST00000458038 IGHV3-73A0A0B4J1V6 119 aa14.31□□□□□ -0.12
CPNE1-220ENST00000458038 PGPEP1LA6NFU8 196 aa14.31□□□□□ -0.12
CPNE1-220ENST00000458038 HMGB3O15347 200 aaKnown RBP14.31□□□□□ -0.12
CPNE1-220ENST00000458038 MBP02144 154 aa14.31□□□□□ -0.12
CPNE1-220ENST00000458038 PLA2G1BP04054 148 aaKnown RBP14.31□□□□□ -0.12
CPNE1-220ENST00000458038 FLI1Q01543 452 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-220ENST00000458038 FAM30AQ9NZY2 134 aa14.31□□□□□ -0.12
CPNE1-220ENST00000458038 COX11Q9Y6N1 276 aa14.31□□□□□ -0.12
CPNE1-220ENST00000458038 A0A087WWC5 75 aa14.3□□□□□ -0.12
CPNE1-220ENST00000458038 A8MWV9 139 aa14.3□□□□□ -0.12
CPNE1-220ENST00000458038 GCHFRP30047 84 aa14.3□□□□□ -0.12
CPNE1-220ENST00000458038 RAB24Q969Q5 203 aa14.3□□□□□ -0.12
CPNE1-220ENST00000458038 TMEM167BQ9NRX6 74 aa14.3□□□□□ -0.12
CPNE1-220ENST00000458038 EPDR1Q9UM22 224 aa14.3□□□□□ -0.12
CPNE1-220ENST00000458038 J3QL48 77 aa14.29□□□□□ -0.12
CPNE1-220ENST00000458038 RNASE3P12724 160 aaKnown RBP14.29□□□□□ -0.12
CPNE1-220ENST00000458038 SUMO1P63165 101 aaKnown RBP14.29□□□□□ -0.12
CPNE1-220ENST00000458038 SERF2P84101 59 aa14.29□□□□□ -0.12
CPNE1-220ENST00000458038 CYB561D1Q8N8Q1 229 aa14.29□□□□□ -0.12
CPNE1-220ENST00000458038 TMEM75Q8N9X5 138 aa14.29□□□□□ -0.12
CPNE1-220ENST00000458038 PSMG3Q9BT73 122 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-220ENST00000458038 IGLV2-11P01706 119 aa14.28□□□□□ -0.12
CPNE1-220ENST00000458038 FGF8P55075 233 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-220ENST00000458038 Q6ZSA8 131 aa14.28□□□□□ -0.12
CPNE1-220ENST00000458038 S100A4P26447 101 aaKnown RBP14.27□□□□□ -0.13
CPNE1-220ENST00000458038 PRNTQ86SH4 94 aa14.27□□□□□ -0.13
CPNE1-220ENST00000458038 PARLQ9H300 379 aa14.27□□□□□ -0.13
CPNE1-220ENST00000458038 GGTLC3B5MD39 225 aa14.26□□□□□ -0.13
CPNE1-220ENST00000458038 CXorf1O96002 111 aa14.26□□□□□ -0.13
CPNE1-220ENST00000458038 SEC11BP0C7V7 166 aa14.26□□□□□ -0.13
CPNE1-220ENST00000458038 FABP5P3A8MUU1 101 aa14.25□□□□□ -0.13
CPNE1-220ENST00000458038 LINC00694P0DN24 101 aa14.25□□□□□ -0.13
CPNE1-220ENST00000458038 HSD17B11Q8NBQ5 300 aa14.25□□□□□ -0.13
CPNE1-220ENST00000458038 RMI2Q96E14 147 aa14.25□□□□□ -0.13
CPNE1-220ENST00000458038 A0A1W2PRE2 83 aa14.24□□□□□ -0.13
CPNE1-220ENST00000458038 ASIPP42127 132 aa14.24□□□□□ -0.13
CPNE1-220ENST00000458038 LGALSLQ3ZCW2 172 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-220ENST00000458038 ACTR3CQ9C0K3 210 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-220ENST00000458038 TNFSF18Q9UNG2 199 aa14.24□□□□□ -0.13
CPNE1-220ENST00000458038 GAGE12JA6NER3 117 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 GAGE1Q13065 139 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 GAGE4Q13068 117 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 GAGE5Q13069 117 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 GAGE13Q4V321 117 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 DAZ4Q86SG3 579 aaKnown RBP14.23□□□□□ -0.13
CPNE1-220ENST00000458038 DEFB104AQ8WTQ1 72 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 LINC00479Q96M42 142 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 DAZ3Q9NR90 486 aaKnown RBP14.23□□□□□ -0.13
CPNE1-220ENST00000458038 IL36BQ9NZH7 164 aa14.23□□□□□ -0.13
CPNE1-220ENST00000458038 RHODO00212 210 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 ATP6V0CP27449 155 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 WFDC2Q14508 124 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 LINC00528Q8N1L1 170 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 Q8N976 141 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 AQP10Q96PS8 301 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 URGCP-MRPS24S4R325 110 aa14.22□□□□□ -0.13
CPNE1-220ENST00000458038 IGKV3D-20A0A0C4DH25 116 aa14.21□□□□□ -0.13
CPNE1-220ENST00000458038 KRTAP29-1A8MX34 341 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-220ENST00000458038 UFSP1Q6NVU6 142 aa14.21□□□□□ -0.13
CPNE1-220ENST00000458038 SYT8Q8NBV8 401 aa14.21□□□□□ -0.13
CPNE1-220ENST00000458038 OR2T35Q8NGX2 323 aa14.21□□□□□ -0.13
CPNE1-220ENST00000458038 DNLZQ5SXM8 178 aa14.2□□□□□ -0.14
CPNE1-220ENST00000458038 Q8N3U1 123 aa14.2□□□□□ -0.14
CPNE1-220ENST00000458038 NKX6-2Q9C056 277 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-220ENST00000458038 LECT2O14960 151 aa14.19□□□□□ -0.14
CPNE1-220ENST00000458038 CHCHD7Q9BUK0 85 aa14.19□□□□□ -0.14
CPNE1-220ENST00000458038 ARL2-SNX15V9GYD0 113 aa14.19□□□□□ -0.14
CPNE1-220ENST00000458038 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-220ENST00000458038 B4DEV8 164 aa14.18□□□□□ -0.14
CPNE1-220ENST00000458038 IFNA7P01567 189 aa14.18□□□□□ -0.14
CPNE1-220ENST00000458038 ELOBQ15370 118 aa14.18□□□□□ -0.14
CPNE1-220ENST00000458038 DNAH8Q96JB1 4490 aa14.18□□□□□ -0.14
CPNE1-220ENST00000458038 TRAV34A0A0B4J273 112 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 DMRTA1Q5VZB9 504 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 NIT1Q86X76 327 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 C14orf178Q8N769 122 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-220ENST00000458038 BAALCQ8WXS3 180 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 HIST1H2BAQ96A08 127 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 SAMD10Q9BYL1 202 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 JPT2Q9H910 190 aa14.17□□□□□ -0.14
CPNE1-220ENST00000458038 RNF222A6NCQ9 220 aa14.16□□□□□ -0.14
CPNE1-220ENST00000458038 RBFOX3A6NFN3 312 aa14.16□□□□□ -0.14
CPNE1-220ENST00000458038 OR11H4Q8NGC9 324 aa14.16□□□□□ -0.14
CPNE1-220ENST00000458038 Q9UF83 564 aa14.16□□□□□ -0.14
CPNE1-220ENST00000458038 A6NHS1 94 aa14.15□□□□□ -0.14
CPNE1-220ENST00000458038 KCNIP4Q6PIL6 250 aa14.15□□□□□ -0.14
CPNE1-220ENST00000458038 COX8CQ7Z4L0 72 aa14.15□□□□□ -0.14
CPNE1-220ENST00000458038 ZFP30Q9Y2G7 519 aa14.15□□□□□ -0.14
CPNE1-220ENST00000458038 ALG5Q9Y673 324 aa14.15□□□□□ -0.14
CPNE1-220ENST00000458038 IGKV2D-24A0A075B6R9 120 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 A0A087WX48 190 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 CTXND1A0A1B0GTU2 59 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 KRBOX1C9JBD0 128 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms