RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 HIST1H2BKO60814 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BJP06899 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 TRGC1P0CF51 173 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BOP23527 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BBP33778 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 INSL3P51460 131 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BDP58876 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BCP62807 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 EGFEM1PQ0D2K5 195 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST2H2BEQ16778 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 TDRG1Q3Y452 100 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.32□□□□□ -1.4
RIF1-208ENST00000457745 GATD1Q8NB37 220 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BHQ93079 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 RNF185Q96GF1 192 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 C9orf85Q96MD7 179 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BNQ99877 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 HIST1H2BMQ99879 126 aa6.32□□□□□ -1.4
RIF1-208ENST00000457745 FAM231BA6NCW3 169 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 NUPR1O60356 82 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 NXPH4O95158 308 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 HTN1P15515 57 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 GATA1P15976 413 aaPredicted RBP6.31□□□□□ -1.4
RIF1-208ENST00000457745 TSPOP30536 169 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 RPS20P60866 119 aaKnown RBP6.31□□□□□ -1.4
RIF1-208ENST00000457745 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 DNLZQ5SXM8 178 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 MCRIP2Q9BUT9 160 aaKnown RBP6.31□□□□□ -1.4
RIF1-208ENST00000457745 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 SAMD10Q9BYL1 202 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 DNAH3Q8TD57 4116 aa6.31□□□□□ -1.4
RIF1-208ENST00000457745 ANK2Q01484 3957 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 IGHV3OR16-12A0A075B7B8 117 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 A0A1B0GUT8 65 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 INSP01308 110 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 OR5AL1P0C617 328 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 NTF3P20783 257 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 ASIPP42127 132 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 LINC00315P59091 139 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 HBBP68871 147 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 AMN1Q8IY45 258 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 RETNQ9HD89 108 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 GSN-AS1Q9NRJ2 163 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 KIF25-AS1Q9Y6Z4 181 aa6.3□□□□□ -1.4
RIF1-208ENST00000457745 IGHV4-4A0A075B6R2 117 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 M0R381 172 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 NCR2O95944 276 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 EVI2AP22794 236 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 RAB4BP61018 213 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 FAM159AQ6UWV7 190 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 URB1-AS1Q96HZ7 61 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 LINC01587Q99440 93 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 GNB1LQ9BYB4 327 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 X6R8D5 127 aa6.29□□□□□ -1.4
RIF1-208ENST00000457745 LOC102724200A0A096LPH7 203 aaPredicted RBP6.28□□□□□ -1.4
RIF1-208ENST00000457745 TRAV26-2A0A0B4J265 109 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 LOC105371267A0A1B0GV96 52 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 CBY3A6NI87 242 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 C1orf196B1AJZ1 125 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 MED14OSP0DP75 135 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 RIGQ13278 110 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 TWIST1Q15672 202 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 MRPL51Q4U2R6 128 aaKnown RBP6.28□□□□□ -1.4
RIF1-208ENST00000457745 ZNF705AQ6ZN79 300 aaPredicted RBP6.28□□□□□ -1.4
RIF1-208ENST00000457745 ZNF493Q6ZR52 646 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 GTSCR1Q86UQ5 136 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 TMEM256Q8N2U0 113 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
RIF1-208ENST00000457745 LINC00467Q9BRT7 94 aa6.28□□□□□ -1.4
RIF1-208ENST00000457745 MRPL16Q9NX20 251 aaKnown RBP6.28□□□□□ -1.4
RIF1-208ENST00000457745 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 A0A087WWL8 130 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 APCSP02743 223 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 RAB4AP20338 218 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 SRIP30626 198 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 CMC4P56277 68 aaPredicted RBP6.27□□□□□ -1.41
RIF1-208ENST00000457745 NDUFA6P56556 154 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 DEFB135Q30KP9 77 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 POM121L12Q8N7R1 296 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 RCHY1Q96PM5 261 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 ALKBH7Q9BT30 221 aaPredicted RBP6.27□□□□□ -1.41
RIF1-208ENST00000457745 CSTL1Q9H114 145 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 Q9UF83 564 aa6.27□□□□□ -1.41
RIF1-208ENST00000457745 XKRY2A2RUG3 117 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 K7EIL1 84 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 DEFB4AO15263 64 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 NPYP01303 97 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 CRYGDP07320 174 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 S100A4P26447 101 aaKnown RBP6.26□□□□□ -1.41
RIF1-208ENST00000457745 FAM104BQ5XKR9 115 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
RIF1-208ENST00000457745 RASL11AQ6T310 242 aa6.26□□□□□ -1.41
RIF1-208ENST00000457745 Q6ZSN1 163 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms