RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
PDLIM2-215ENST00000456545 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
PDLIM2-215ENST00000456545 TMSB15BA0A087X1C1 80 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 GRIFINA4D1Z8 144 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 ZNF674Q2M3X9 581 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 ZNF506Q5JVG8 444 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 PTH2Q96A98 100 aa12.5□□□□□ -0.41
PDLIM2-215ENST00000456545 PRSS29PA6NIE9 313 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 H3BVH4 76 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 K7EQD1 137 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 RS1O15537 224 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 CFAP126Q5VTH2 177 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 SYT8Q8NBV8 401 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 UPK3BQ9BT76 320 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 IL36BQ9NZH7 164 aa12.49□□□□□ -0.41
PDLIM2-215ENST00000456545 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
PDLIM2-215ENST00000456545 TTC32Q5I0X7 151 aa12.48□□□□□ -0.41
PDLIM2-215ENST00000456545 LYPD5Q6UWN5 251 aa12.48□□□□□ -0.41
PDLIM2-215ENST00000456545 PRADC1Q9BSG0 188 aa12.48□□□□□ -0.41
PDLIM2-215ENST00000456545 PHLDA3Q9Y5J5 127 aa12.48□□□□□ -0.41
PDLIM2-215ENST00000456545 DNAH6Q9C0G6 4158 aa12.48□□□□□ -0.41
PDLIM2-215ENST00000456545 A0A1B0GVG6 124 aa12.47□□□□□ -0.41
PDLIM2-215ENST00000456545 A8MWV9 139 aa12.47□□□□□ -0.41
PDLIM2-215ENST00000456545 RTL8CO15255 209 aa12.47□□□□□ -0.41
PDLIM2-215ENST00000456545 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
PDLIM2-215ENST00000456545 RPL35P42766 123 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-215ENST00000456545 PRR27Q6MZM9 219 aa12.47□□□□□ -0.41
PDLIM2-215ENST00000456545 EPPK1P58107 5090 aaKnown RBP12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 SIVA1O15304 175 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 PDE6DO43924 150 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 LINC01559Q495D7 138 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 DNLZQ5SXM8 178 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 ALKAL2Q6UX46 152 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 C6orf223Q8N319 242 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 MED9Q9NWA0 146 aa12.46□□□□□ -0.41
PDLIM2-215ENST00000456545 NXPH4O95158 308 aa12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 BLOC1S1P78537 153 aa12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 RHOHQ15669 191 aa12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 PIK3CD-AS1Q5SR53 167 aa12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 VAX2Q9UIW0 290 aa12.45□□□□□ -0.42
PDLIM2-215ENST00000456545 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 TRBV6-4A0A1B0GX49 114 aa12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 BCL2P10415 239 aa12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 MGST1P10620 155 aaKnown RBP12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 TAGLN2P37802 199 aaKnown RBP12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 C11orf52Q96A22 123 aa12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
PDLIM2-215ENST00000456545 M0R381 172 aa12.43□□□□□ -0.42
PDLIM2-215ENST00000456545 GNG4P50150 75 aa12.43□□□□□ -0.42
PDLIM2-215ENST00000456545 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-215ENST00000456545 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
PDLIM2-215ENST00000456545 PARLQ9H300 379 aa12.43□□□□□ -0.42
PDLIM2-215ENST00000456545 A0A1W2PPQ1 181 aa12.42□□□□□ -0.42
PDLIM2-215ENST00000456545 RAB19A4D1S5 217 aa12.42□□□□□ -0.42
PDLIM2-215ENST00000456545 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
PDLIM2-215ENST00000456545 ZFP2Q6ZN57 461 aa12.42□□□□□ -0.42
PDLIM2-215ENST00000456545 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
PDLIM2-215ENST00000456545 TRAV9-2A0A087WT02 112 aa12.41□□□□□ -0.42
PDLIM2-215ENST00000456545 RPL19P84098 196 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-215ENST00000456545 FAM74A4Q5TZK3 123 aa12.41□□□□□ -0.42
PDLIM2-215ENST00000456545 JPT2Q9H910 190 aa12.41□□□□□ -0.42
PDLIM2-215ENST00000456545 RHODO00212 210 aa12.4□□□□□ -0.42
PDLIM2-215ENST00000456545 DNAH10Q8IVF4 4471 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 MED14OSP0DP75 135 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 SAMD10Q9BYL1 202 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 SCRT2Q9NQ03 307 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 BOLA1Q9Y3E2 137 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 LY96Q9Y6Y9 160 aa12.39□□□□□ -0.43
PDLIM2-215ENST00000456545 A0A087WWL8 130 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 CXCL1P09341 107 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 EVI2AP22794 236 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 SSTP61278 116 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 SPANXN1Q5VSR9 72 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 SMIM12Q96EX1 92 aa12.38□□□□□ -0.43
PDLIM2-215ENST00000456545 BIRC6Q9NR09 4857 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 TRAV8-6A0A0B4J262 113 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 RBFOX3A6NFN3 312 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 RPS20P60866 119 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 GAGE1Q13065 139 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 GAGE4Q13068 117 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 GAGE5Q13069 117 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 Q6ZSN1 163 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 ZNF575Q86XF7 245 aa12.37□□□□□ -0.43
PDLIM2-215ENST00000456545 OR10J3Q5JRS4 329 aa12.36□□□□□ -0.43
PDLIM2-215ENST00000456545 WFDC10BQ8IUB3 73 aa12.36□□□□□ -0.43
PDLIM2-215ENST00000456545 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
PDLIM2-215ENST00000456545 KRTAP1-5Q9BYS1 174 aa12.36□□□□□ -0.43
PDLIM2-215ENST00000456545 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms