RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 LINC00315P59091 139 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 MRPL32Q9BYC8 188 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 H7C1H1 209 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV3-23P01764 117 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHG2P01859 326 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 TMEM200BQ69YZ2 307 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 C21orf62Q9NYP8 219 aa3.43□□□□□ -1.86
DEPDC1-202ENST00000456315 IGLV4-69A0A075B6H9 119 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 TMEM265A0A087WTH1 108 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 B9A039 149 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 INS-IGF2F8WCM5 200 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 IGLV1-47P01700 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 IGKCP01834 107 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 LYZP61626 148 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 ZNF833PQ6ZTB9 187 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 ZNF502Q8TBZ5 544 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 COL25A1Q9BXS0 654 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 A0A1B0GW15 77 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 GAGE12JA6NER3 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 GAGE7O76087 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV3-33P01772 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 GAGE12FP0CL80 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 GAGE12GP0CL81 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 GAGE12IP0CL82 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 GAGE4Q13068 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 LPAL2Q16609 132 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 Q6ZT83 130 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 C10orf126Q8N4M7 172 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 MDS2Q8NDY4 140 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 OR10X1Q8NGY0 326 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 ANAPC13Q9BS18 74 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 CHCHD5Q9BSY4 110 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 A4D1N5 150 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 PRM2P04554 102 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 AGPAT4-IT1Q9H0P7 198 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 SIGLEC9Q9Y336 463 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 LINC01546A6NGU7 62 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 F8VRH5 84 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 K7EM74 188 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV1-46P01743 117 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 IL4P05112 153 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 COX8CQ7Z4L0 72 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 Q8N2B8 174 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 Q8N8P6 123 aa3.42□□□□□ -1.86
DEPDC1-202ENST00000456315 LOXP28300 417 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 FOLR3P41439 243 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 TTC32Q5I0X7 151 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 CNEP1R1Q8N9A8 125 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 TRGV11A0A075B6L2 103 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 C9JAW5 83 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 SCGB2A1O75556 95 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 GPHB5Q86YW7 130 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 NGBQ9NPG2 151 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 HECTD4Q9Y4D8 3996 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV3-66A0A0C4DH42 116 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 TIMM8AO60220 97 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV3-30P01768 117 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 IGHV3-30-5P0DP03 117 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 NEXN-AS1Q8NBZ9 246 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 KIR2DL5BQ8NHK3 375 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 FMC1Q96HJ9 113 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 DUX3Q96PT4 197 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 RNF7Q9UBF6 113 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 DPM2O94777 84 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 P0DMU3 169 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 FAM231AP0DMU4 169 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 FAM231CP0DMU5 169 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 DLX6P56179 175 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 DAZAP1Q96EP5 407 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 TGP01266 2768 aa3.41□□□□□ -1.86
DEPDC1-202ENST00000456315 LINC00694P0DN24 101 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 EDN2P20800 178 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 FAM27E3Q08E93 113 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 IL17RELQ6ZVW7 336 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 VCX2Q9H322 139 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 SLC25A15Q9Y619 301 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 RS1O15537 224 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 CTSGP08311 255 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 PSMB2P49721 201 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 OR4C13Q8NGP0 309 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 CXXC4Q9H2H0 198 aa3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 SOX21Q9Y651 276 aaPredicted RBP3.4□□□□□ -1.86
DEPDC1-202ENST00000456315 RBAKDNA6NC62 111 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 CT45A10P0DMU9 189 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 GATA4P43694 442 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 NSUN5P1Q3KNT7 163 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 MYOZ3Q8TDC0 251 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 TMEM190Q8WZ59 177 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 EEF1AKMT3Q96AZ1 226 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 LITAFQ99732 161 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 OTORQ9NRC9 128 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 IGIPA6NJ69 53 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 TWIST1Q15672 202 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms