RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NRACQ8N912 160 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 TMEM213A2RRL7 107 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 K7ENP7 123 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 MRPL51Q4U2R6 128 aaKnown RBP4.15□□□□□ -1.74
CSMD3-204ENST00000455883 C8orf86Q6ZUL3 223 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 IL17DQ8TAD2 202 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 HCSTQ9UBK5 93 aa4.15□□□□□ -1.74
CSMD3-204ENST00000455883 PEAR1Q5VY43 1037 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-204ENST00000455883 LINC01356Q8N9X3 169 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
CSMD3-204ENST00000455883 ARMS2P0C7Q2 107 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 PRR20EP86478 221 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 PRR20CP86479 221 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 PRR20DP86480 221 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 PRR20BP86481 221 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 PRR20AP86496 221 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 SPTSSBQ8NFR3 76 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 FXYD5Q96DB9 178 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 CGB1A6NKQ9 187 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 F8WDY8 70 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 K7EMT4 169 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 MST1LQ2TV78 715 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 EXOC3-AS1Q8N2X6 119 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 COL27A1Q8IZC6 1860 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-204ENST00000455883 TRBV7-3A0A075B6L6 115 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 COL8A2P25067 703 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 HAMPP81172 84 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 HIST2H2BDQ6DRA6 164 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 FAM216BQ8N7L0 139 aa4.15□□□□□ -1.75
CSMD3-204ENST00000455883 NREPQ16612 68 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 MUC22E2RYF6 1773 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-204ENST00000455883 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 LY6DQ14210 128 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 WFDC3Q8IUB2 231 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 TOMM6Q96B49 74 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 MDFICQ9P1T7 246 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 IGLV3-9A0A075B6K5 115 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 SNAI2O43623 268 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 LINC00479Q96M42 142 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 RHPN1-AS1Q9BWJ2 59 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 TEX15Q9BXT5 2789 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 GNG5P63218 68 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 PTH2Q96A98 100 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 IGLL5B9A064 214 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 NDUFS7O75251 213 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 VSIRQ9H7M9 311 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 PRSS57Q6UWY2 283 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 C16orf47Q6ZP98 133 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-204ENST00000455883 DEPPQ9NTK1 212 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 A0A1W2PRX2 142 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 APELAP0DMC3 54 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 LINC00574Q9H8X3 128 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 COX7A2LO14548 114 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 IGHV1-46P01743 117 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 LGALS9O00182 355 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 GTSF1Q8WW33 167 aa4.14□□□□□ -1.75
CSMD3-204ENST00000455883 NSUN5P1Q3KNT7 163 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 NPBQ8NG41 125 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 MLST8Q9BVC4 326 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 PSCAO43653 123 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 TMEM200BQ69YZ2 307 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 SMIM9A6NGZ8 99 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 H3BUX3 64 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 SP5Q6BEB4 398 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-204ENST00000455883 FLVCR1-AS1Q8TAF5 88 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 FAM236DA0A1B0GTK5 79 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 FAM236CP0DP71 79 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 A0A0J9YX75 114 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 VPREB1P12018 145 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 C3orf22Q8N5N4 141 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
CSMD3-204ENST00000455883 IGHV3-21A0A0B4J1V1 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 SAP30O75446 220 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 MIAQ16674 131 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 TRBV30A0A0K0K1B3 111 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 BCE1O60756 84 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 VOPP1Q96AW1 172 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 FANCD2OSQ96PS1 177 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 A0A0U1RQV1 116 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 LINC00473A8K010 186 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IGLV1-44P01699 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IGHV7-4-1A0A0J9YVY3 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 DEFB124Q8NES8 71 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 SND1-IT1Q9HBX3 110 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV1-12A0A0C4DH73 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 CENPVL3A0A0U1RRI6 287 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IBA57-AS1B1ANH7 110 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV1D-12P01611 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 WFDC12Q8WWY7 111 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 CNFNQ9BYD5 112 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 TCL1BO95988 128 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 C1orf147Q96MC9 270 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-204ENST00000455883 TEP1Q99973 2627 aaKnown RBP4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV1-27A0A075B6S5 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 MORN5Q5VZ52 161 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms