RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 ATP5LO75964 103 aa9.21□□□□□ -0.93
SEMA4D-213ENST00000455551 IGKV3-20P01619 116 aa9.21□□□□□ -0.93
SEMA4D-213ENST00000455551 ZMAT4Q9H898 229 aa9.21□□□□□ -0.93
SEMA4D-213ENST00000455551 SRSF1Q07955 248 aaKnown RBP eCLIP9.21□□□□□ -0.94
SEMA4D-213ENST00000455551 MRAP2Q96G30 205 aa9.21□□□□□ -0.94
SEMA4D-213ENST00000455551 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 CUBNO60494 3623 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 RNASE3P12724 160 aaKnown RBP9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 CFHR3Q02985 330 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 PRB1P04280 392 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 TLN2Q9Y4G6 2542 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 FBN2P35556 2912 aa9.2□□□□□ -0.94
SEMA4D-213ENST00000455551 A6NDN8 102 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 H3BUT2 72 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 ZNF688P0C7X2 276 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 GCSHP23434 173 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 AP1S3Q96PC3 154 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 JPT2Q9H910 190 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 SONP18583 2426 aaKnown RBP9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 BRI3O95415 125 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 MYO9AB2RTY4 2548 aa9.19□□□□□ -0.94
SEMA4D-213ENST00000455551 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 K7EMI3 77 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 TGFAP01135 160 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 NAV2Q8IVL1 2488 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 SIVA1O15304 175 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 PSMG4Q5JS54 123 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 MXRA5Q9NR99 2828 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 USP24Q9UPU5 2620 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 PSMB8P28062 276 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 SCGB3A1Q96QR1 104 aa9.18□□□□□ -0.94
SEMA4D-213ENST00000455551 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 A0A087WX48 190 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 TRAV12-2A0A075B6T6 113 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 A0A087WWL8 130 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 ID1P41134 155 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 FXYD2P54710 66 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 TRBV25-1A0A075B6N4 114 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 CD7P09564 240 aa9.17□□□□□ -0.94
SEMA4D-213ENST00000455551 GAGE10A6NGK3 116 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 H3BRM9 83 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 LINC01356Q8N9X3 169 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 C9orf118A6NHY6 69 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 K7ERJ3 54 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 SYNJ2BPP57105 145 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 KLLNB2CW77 178 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 C2orf66Q6UXQ4 117 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
SEMA4D-213ENST00000455551 F5H697 171 aa9.15□□□□□ -0.94
SEMA4D-213ENST00000455551 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
SEMA4D-213ENST00000455551 FAM74A4Q5TZK3 123 aa9.15□□□□□ -0.95
SEMA4D-213ENST00000455551 C20orf78Q9BR46 151 aa9.15□□□□□ -0.95
SEMA4D-213ENST00000455551 K7EMT4 169 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 RBX1P62877 108 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 TOMM6Q96B49 74 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 GAGE12BA1L429 117 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 GATA3P23771 443 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 CST9LQ9H4G1 147 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 F8VRH5 84 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 SLC25A16P16260 332 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 TEX15Q9BXT5 2789 aa9.14□□□□□ -0.95
SEMA4D-213ENST00000455551 H7C1H1 209 aa9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 PLNP26678 52 aa9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 DSCR9P59020 149 aa9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 SPINK13Q1W4C9 94 aa9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 NHP2Q9NX24 153 aaKnown RBP9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 MDFICQ9P1T7 246 aa9.13□□□□□ -0.95
SEMA4D-213ENST00000455551 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 A0A087WW49 117 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 LINC00315P59091 139 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 SUMO4Q6EEV6 95 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 BAALCQ8WXS3 180 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 EMP1P54849 157 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 A0A096LNT2 108 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 SMIM13P0DJ93 91 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms