RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 DUX3Q96PT4 197 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 RHPN1-AS1Q9BWJ2 59 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 SEC11CQ9BY50 192 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 NKX6-2Q9C056 277 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 CMYA5Q8N3K9 4069 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 KIR2DL5BA0A0G2JN68 375 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 KIR2DL5BA0A0G2JPC4 375 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 C2orf70A6NJV1 201 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 A8MWP6 167 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 F6UZH7 168 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 ADCYAP1P18509 176 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 CBLN1P23435 193 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 GALR1P47211 349 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 DEFA6Q01524 100 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 RPL18AQ02543 176 aaKnown RBP3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 PDE6HQ13956 83 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 PDZD11Q5EBL8 140 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 OR10J3Q5JRS4 329 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 ADAMTSL4-AS1Q5T5F5 129 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 C9orf47Q6ZRZ4 202 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 KIR2DL5AQ8N109 375 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 EXOC3-AS1Q8N2X6 119 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 CHCHD10Q8WYQ3 142 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 PACRGQ96M98 296 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 Q9H3A6 140 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 OTORQ9NRC9 128 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 EPDR1Q9UM22 224 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 CARHSP1Q9Y2V2 147 aaKnown RBP3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 KLF12Q9Y4X4 402 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 AGRNO00468 2067 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 NBEAL1Q6ZS30 2694 aa3.81□□□□□ -1.8
HMGB1P4-201ENST00000455362 NOTCH1P46531 2555 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZNF727A8MUV8 499 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 M0R036 132 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 SLC17A3O00476 420 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 DLEU1O43261 78 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZNF253O75346 499 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 APOC3P02656 99 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 S100A8P05109 93 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 SLC25A5P05141 298 aaKnown RBP3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 OR5AL1P0C617 328 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 FOLR2P14207 255 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGLL1P15814 213 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 PSG9Q00887 426 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 GUCA2BQ16661 112 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 TMEM241Q24JQ0 296 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 TCF24Q7RTU0 167 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 NDUFA11Q86Y39 141 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 C5orf17Q8NAS9 161 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 RPUSD4Q96CM3 377 aaKnown RBP3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 SMIM7Q9BQ49 75 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 TCEAL7Q9BRU2 100 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 DERL1Q9BUN8 251 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 JPT2Q9H910 190 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZNF331Q9NQX6 463 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
HMGB1P4-201ENST00000455362 TRBV20OR9-2A0A075B6H5 130 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 TRAV8-2A0A0B4J237 113 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 M0R3E3 92 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 PEX7O00628 323 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 CRXO43186 299 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 PPBPP02775 128 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 TCRAP04437 139 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 HLA-DMBP28068 263 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 APOC4P55056 127 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 GNG5P63218 68 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 KRTAP24-1Q3LI83 254 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 C9orf66Q5T8R8 295 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 LCN12Q6JVE5 192 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 FAM19A1Q7Z5A9 133 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 SVBPQ8N300 66 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 C6orf223Q8N319 242 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 CMTM2Q8TAZ6 248 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 HIST1H2BAQ96A08 127 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 TVP23CQ96ET8 276 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 LINC00479Q96M42 142 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 SLC50A1Q9BRV3 221 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 ANK2Q01484 3957 aa3.79□□□□□ -1.8
HMGB1P4-201ENST00000455362 MGAM2Q2M2H8 2515 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGKV3-7A0A075B6H7 116 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGHV3-16A0A0C4DH30 117 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZNF705FA8MVS1 300 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 ISLRO14498 428 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 SOCS3O14543 225 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 OVOL1O14753 267 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGLV2-11P01706 119 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 SLPIP03973 132 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 AKR1C3P42330 323 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 CSN1S1P47710 185 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 CD164Q04900 197 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 TMEM183BQ1AE95 376 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 DEFB114Q30KQ6 69 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 SAMD13Q5VXD3 122 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 GOLT1AQ6ZVE7 132 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms