RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZNF506Q5JVG8 444 aa9.83□□□□□ -0.84
HDAC4-205ENST00000454542 BAGE2Q86Y30 109 aa9.83□□□□□ -0.84
HDAC4-205ENST00000454542 UBE2DNLQ8IWF7 75 aa9.83□□□□□ -0.84
HDAC4-205ENST00000454542 SMIM12Q96EX1 92 aa9.83□□□□□ -0.84
HDAC4-205ENST00000454542 SCRT2Q9NQ03 307 aa9.83□□□□□ -0.84
HDAC4-205ENST00000454542 EPPK1P58107 5090 aaKnown RBP9.83□□□□□ -0.84
HDAC4-205ENST00000454542 HECTD4Q9Y4D8 3996 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 PGPEP1LA6NFU8 196 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 RS1O15537 224 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 IGLV2-8P01709 118 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 ORM1P02763 201 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 LINC00588Q9Y4M8 146 aa9.82□□□□□ -0.84
HDAC4-205ENST00000454542 TRBV20OR9-2A0A075B6H5 130 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 H3BVH4 76 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 M0R036 132 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 CIDEAO60543 219 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 MED14OSP0DP75 135 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 GATA1P15976 413 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-205ENST00000454542 CFAP126Q5VTH2 177 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 Q6ZR54 194 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 ZNRF2Q8NHG8 242 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 UPK3BQ9BT76 320 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
HDAC4-205ENST00000454542 TRGV4A0A0C4DH28 118 aa9.8□□□□□ -0.84
HDAC4-205ENST00000454542 PAX4O43316 350 aa9.8□□□□□ -0.84
HDAC4-205ENST00000454542 NDUFS6O75380 124 aaKnown RBP9.8□□□□□ -0.84
HDAC4-205ENST00000454542 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
HDAC4-205ENST00000454542 CCL18P55774 89 aa9.8□□□□□ -0.84
HDAC4-205ENST00000454542 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
HDAC4-205ENST00000454542 C9JCJ5 164 aa9.79□□□□□ -0.84
HDAC4-205ENST00000454542 NXPH4O95158 308 aa9.79□□□□□ -0.84
HDAC4-205ENST00000454542 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
HDAC4-205ENST00000454542 UFSP1Q6NVU6 142 aa9.79□□□□□ -0.84
HDAC4-205ENST00000454542 PARLQ9H300 379 aa9.79□□□□□ -0.84
HDAC4-205ENST00000454542 MRPS16Q9Y3D3 137 aaKnown RBP9.79□□□□□ -0.84
HDAC4-205ENST00000454542 RAB19A4D1S5 217 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 GRIFINA4D1Z8 144 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 TMEM250H0YL14 139 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 SNAI2O43623 268 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 GNG4P50150 75 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 RPL19P84098 196 aaKnown RBP9.78□□□□□ -0.84
HDAC4-205ENST00000454542 ESRGQ1W209 222 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 MED9Q9NWA0 146 aa9.78□□□□□ -0.84
HDAC4-205ENST00000454542 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
HDAC4-205ENST00000454542 RBFOX3A6NFN3 312 aa9.77□□□□□ -0.85
HDAC4-205ENST00000454542 A8MWV9 139 aa9.77□□□□□ -0.85
HDAC4-205ENST00000454542 K7EQD1 137 aa9.77□□□□□ -0.85
HDAC4-205ENST00000454542 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.85
HDAC4-205ENST00000454542 PRR27Q6MZM9 219 aa9.77□□□□□ -0.85
HDAC4-205ENST00000454542 ZFP2Q6ZN57 461 aa9.77□□□□□ -0.85
HDAC4-205ENST00000454542 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-205ENST00000454542 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
HDAC4-205ENST00000454542 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
HDAC4-205ENST00000454542 TEX261Q6UWH6 196 aa9.76□□□□□ -0.85
HDAC4-205ENST00000454542 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
HDAC4-205ENST00000454542 BIRC6Q9NR09 4857 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 OR5AL1P0C617 328 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 MGST1P10620 155 aaKnown RBP9.75□□□□□ -0.85
HDAC4-205ENST00000454542 GYPEP15421 78 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 RHOHQ15669 191 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 TOR2AQ5JU69 321 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 ZFP82Q8N141 532 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
HDAC4-205ENST00000454542 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 RHODO00212 210 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 SRIP30626 198 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 NEGR1Q7Z3B1 354 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 PCNPQ8WW12 178 aaKnown RBP9.74□□□□□ -0.85
HDAC4-205ENST00000454542 SFRP2Q96HF1 295 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 SAMD10Q9BYL1 202 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 JPT2Q9H910 190 aa9.74□□□□□ -0.85
HDAC4-205ENST00000454542 K7EN84 100 aa9.73□□□□□ -0.85
HDAC4-205ENST00000454542 TIRAPP58753 221 aa9.73□□□□□ -0.85
HDAC4-205ENST00000454542 OR10AG1Q8NH19 301 aa9.73□□□□□ -0.85
HDAC4-205ENST00000454542 BIN3Q9NQY0 253 aa9.73□□□□□ -0.85
HDAC4-205ENST00000454542 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 M0R2N4 97 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 M0R381 172 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 RTL8CO15255 209 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 CRYGDP07320 174 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 RPS20P60866 119 aaKnown RBP9.72□□□□□ -0.85
HDAC4-205ENST00000454542 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 Q6ZSN1 163 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 KRTAP1-5Q9BYS1 174 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 Q9H8V8 135 aa9.72□□□□□ -0.85
HDAC4-205ENST00000454542 A0A1W2PPQ1 181 aa9.71□□□□□ -0.86
HDAC4-205ENST00000454542 SRP19P09132 144 aaKnown RBP9.71□□□□□ -0.86
HDAC4-205ENST00000454542 PRADC1Q9BSG0 188 aa9.71□□□□□ -0.86
HDAC4-205ENST00000454542 LY96Q9Y6Y9 160 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms