RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 ZNF674Q2M3X9 581 aa4.83□□□□□ -1.64
CHEK2-220ENST00000454252 CENPWQ5EE01 88 aa4.83□□□□□ -1.64
CHEK2-220ENST00000454252 OR10J6PQ8NGY7 276 aa4.83□□□□□ -1.64
CHEK2-220ENST00000454252 OCC1Q8TAD7 63 aa4.83□□□□□ -1.64
CHEK2-220ENST00000454252 RNASE8Q8TDE3 154 aaKnown RBP4.83□□□□□ -1.64
CHEK2-220ENST00000454252 FMC1Q96HJ9 113 aa4.83□□□□□ -1.64
CHEK2-220ENST00000454252 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
CHEK2-220ENST00000454252 GAGE12BA1L429 117 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 KLLNB2CW77 178 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 C9JCJ5 164 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 J3KRW8 73 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 GAGE7O76087 117 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 GAGE12FP0CL80 117 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 GAGE12GP0CL81 117 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 GAGE12IP0CL82 117 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 BTF3P20290 206 aaKnown RBP4.82□□□□□ -1.64
CHEK2-220ENST00000454252 TSPOP30536 169 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 BTN1A1Q13410 526 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 C10orf91Q5T1B1 145 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 TMEM78Q5T7P6 136 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 COX8CQ7Z4L0 72 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 BAGE2Q86Y30 109 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 TMEM183AQ8IXX5 376 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 ZC2HC1AQ96GY0 325 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 ODF3Q96PU9 254 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 SMIM7Q9BQ49 75 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 C11orf21Q9P2W6 132 aa4.82□□□□□ -1.64
CHEK2-220ENST00000454252 TRBV7-9A0A0J9YWB2 115 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 FBLL1A6NHQ2 334 aaKnown RBP4.81□□□□□ -1.64
CHEK2-220ENST00000454252 K7EQM0 130 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 ZNF324O75467 553 aaPredicted RBP4.81□□□□□ -1.64
CHEK2-220ENST00000454252 GCGP01275 180 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 S100A9P06702 114 aaKnown RBP4.81□□□□□ -1.64
CHEK2-220ENST00000454252 UBE2G1P62253 170 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
CHEK2-220ENST00000454252 NDUFA5Q16718 116 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 TTC32Q5I0X7 151 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 GFI1BQ5VTD9 330 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 C16orf74Q96GX8 76 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 UPK3BQ9BT76 320 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 ZFP30Q9Y2G7 519 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 MRPS16Q9Y3D3 137 aaKnown RBP4.81□□□□□ -1.64
CHEK2-220ENST00000454252 TIMM8BQ9Y5J9 83 aaPredicted RBP4.81□□□□□ -1.64
CHEK2-220ENST00000454252 LENEPQ9Y5L5 61 aa4.81□□□□□ -1.64
CHEK2-220ENST00000454252 C19orf71A6NCJ1 209 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 F8W036 122 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 RNASE4P34096 147 aaKnown RBP4.8□□□□□ -1.64
CHEK2-220ENST00000454252 CDKN1BP46527 198 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 GNG4P50150 75 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 TMEM241Q24JQ0 296 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 FAM74A3Q4VXF1 159 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 SAPCD1Q5SSQ6 148 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 Q6AWC8 147 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 Q6ZTI0 123 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 LINC00612Q8N6U2 182 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 VSIG2Q96IQ7 327 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 C18orf15Q96N68 181 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 SEC11CQ9BY50 192 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 CARHSP1Q9Y2V2 147 aaKnown RBP4.8□□□□□ -1.64
CHEK2-220ENST00000454252 LY96Q9Y6Y9 160 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
CHEK2-220ENST00000454252 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
CHEK2-220ENST00000454252 A0A096LPF7 62 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 TRAV12-3A0A0B4J271 114 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 A0A1W2PPQ1 181 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 C7orf71A4D174 169 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 SH2D1AO60880 128 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 GPX1P07203 203 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 MGST1P10620 155 aaKnown RBP4.79□□□□□ -1.64
CHEK2-220ENST00000454252 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
CHEK2-220ENST00000454252 LEPP41159 167 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 SMUG1Q53HV7 270 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 TMEM263Q8WUH6 116 aaKnown RBP4.79□□□□□ -1.64
CHEK2-220ENST00000454252 FRZBQ92765 325 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 ISOC2Q96AB3 205 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
CHEK2-220ENST00000454252 RNASE7Q9H1E1 156 aaKnown RBP4.79□□□□□ -1.64
CHEK2-220ENST00000454252 A0A087WTM6 91 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 J3QL48 77 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 NXPH4O95158 308 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 IGHV3-53P01767 116 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 PFN1P07737 140 aaKnown RBP4.78□□□□□ -1.64
CHEK2-220ENST00000454252 RPL19P84098 196 aaKnown RBP4.78□□□□□ -1.64
CHEK2-220ENST00000454252 ADIRFQ15847 76 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 ANXA2RQ3ZCQ2 193 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 MUC21Q5SSG8 566 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 PRR27Q6MZM9 219 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 ATRAIDQ6UW56 229 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 SMIM12Q96EX1 92 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 NDFIP1Q9BT67 221 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 TP53TG3Q9ULZ0 132 aa4.78□□□□□ -1.64
CHEK2-220ENST00000454252 TRAV21A0A0B4J279 112 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms