RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DEFB136Q30KP8 78 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 UNQ9165/PRO28630Q6UXU0 137 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
SNX17-204ENST00000453453 K7EMT4 169 aa12.03□□□□□ -0.48
SNX17-204ENST00000453453 ZNF207O43670 478 aaKnown RBP12.03□□□□□ -0.48
SNX17-204ENST00000453453 RPL7P18124 248 aaKnown RBP12.03□□□□□ -0.48
SNX17-204ENST00000453453 BMI1P35226 326 aa12.03□□□□□ -0.48
SNX17-204ENST00000453453 IFI27P40305 119 aaPredicted RBP12.03□□□□□ -0.48
SNX17-204ENST00000453453 EXOC3-AS1Q8N2X6 119 aa12.03□□□□□ -0.48
SNX17-204ENST00000453453 OR8A1Q8NGG7 326 aa12.03□□□□□ -0.48
SNX17-204ENST00000453453 LGALS9O00182 355 aa12.02□□□□□ -0.49
SNX17-204ENST00000453453 MRPS12O15235 138 aaKnown RBP12.02□□□□□ -0.49
SNX17-204ENST00000453453 FABP2P12104 132 aa12.02□□□□□ -0.49
SNX17-204ENST00000453453 NDUFA11Q86Y39 141 aa12.02□□□□□ -0.49
SNX17-204ENST00000453453 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.49
SNX17-204ENST00000453453 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
SNX17-204ENST00000453453 TMEM189A5PLL7 270 aa12.01□□□□□ -0.49
SNX17-204ENST00000453453 D6R8Y8 96 aa12.01□□□□□ -0.49
SNX17-204ENST00000453453 H3BUT2 72 aa12.01□□□□□ -0.49
SNX17-204ENST00000453453 SYNJ2BPP57105 145 aa12.01□□□□□ -0.49
SNX17-204ENST00000453453 MCRIP2Q9BUT9 160 aaKnown RBP12.01□□□□□ -0.49
SNX17-204ENST00000453453 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
SNX17-204ENST00000453453 CIDEAO60543 219 aa12□□□□□ -0.49
SNX17-204ENST00000453453 CRIP1P50238 77 aa12□□□□□ -0.49
SNX17-204ENST00000453453 CACNG7P62955 275 aa12□□□□□ -0.49
SNX17-204ENST00000453453 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
SNX17-204ENST00000453453 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
SNX17-204ENST00000453453 ZMAT4Q9H898 229 aa12□□□□□ -0.49
SNX17-204ENST00000453453 PEMTQ9UBM1 199 aa12□□□□□ -0.49
SNX17-204ENST00000453453 U3KQE9 123 aa12□□□□□ -0.49
SNX17-204ENST00000453453 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.49
SNX17-204ENST00000453453 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
SNX17-204ENST00000453453 H3BTX0 84 aa12□□□□□ -0.49
SNX17-204ENST00000453453 CCL24O00175 119 aa12□□□□□ -0.49
SNX17-204ENST00000453453 BUB3O43684 328 aa12□□□□□ -0.49
SNX17-204ENST00000453453 SAP30O75446 220 aa12□□□□□ -0.49
SNX17-204ENST00000453453 SMIM13P0DJ93 91 aa12□□□□□ -0.49
SNX17-204ENST00000453453 SLURP1P55000 103 aa12□□□□□ -0.49
SNX17-204ENST00000453453 NSUN5P1Q3KNT7 163 aa12□□□□□ -0.49
SNX17-204ENST00000453453 TM4SF20Q53R12 229 aa12□□□□□ -0.49
SNX17-204ENST00000453453 HIST2H2BDQ6DRA6 164 aa12□□□□□ -0.49
SNX17-204ENST00000453453 RAX2Q96IS3 184 aa12□□□□□ -0.49
SNX17-204ENST00000453453 SPCS1Q9Y6A9 102 aa12□□□□□ -0.49
SNX17-204ENST00000453453 IGHV3-49A0A0A0MS15 119 aa11.99□□□□□ -0.49
SNX17-204ENST00000453453 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
SNX17-204ENST00000453453 LYZL1Q6UWQ5 148 aa11.99□□□□□ -0.49
SNX17-204ENST00000453453 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
SNX17-204ENST00000453453 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 KRTAP10-3P60369 221 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 FHL3Q13643 280 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 KRTAP24-1Q3LI83 254 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
SNX17-204ENST00000453453 SH2D1AO60880 128 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 TAL2Q16559 108 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 RHPN1-AS1Q9BWJ2 59 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 NXT2Q9NPJ8 142 aaKnown RBP11.97□□□□□ -0.49
SNX17-204ENST00000453453 TIMM8BQ9Y5J9 83 aaPredicted RBP11.97□□□□□ -0.49
SNX17-204ENST00000453453 TMEM213A2RRL7 107 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 ATP5LO75964 103 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 EVI2AP22794 236 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 PRIMA1Q86XR5 153 aa11.97□□□□□ -0.49
SNX17-204ENST00000453453 ADARB2-AS1A8MUL3 147 aa11.96□□□□□ -0.5
SNX17-204ENST00000453453 FCER1GP30273 86 aa11.96□□□□□ -0.5
SNX17-204ENST00000453453 CKS2P33552 79 aa11.96□□□□□ -0.5
SNX17-204ENST00000453453 SAMD5Q5TGI4 173 aa11.96□□□□□ -0.5
SNX17-204ENST00000453453 AMN1Q8IY45 258 aa11.96□□□□□ -0.5
SNX17-204ENST00000453453 GLMPQ8WWB7 406 aa11.96□□□□□ -0.5
SNX17-204ENST00000453453 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.5
SNX17-204ENST00000453453 SNAI2O43623 268 aa11.95□□□□□ -0.5
SNX17-204ENST00000453453 TMEM158Q8WZ71 300 aa11.95□□□□□ -0.5
SNX17-204ENST00000453453 LOC389332A0A1B0GUA5 103 aa11.94□□□□□ -0.5
SNX17-204ENST00000453453 PF4P02776 101 aa11.94□□□□□ -0.5
SNX17-204ENST00000453453 CITED1Q99966 193 aa11.94□□□□□ -0.5
SNX17-204ENST00000453453 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
SNX17-204ENST00000453453 J3QR89 54 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 OVOL1O14753 267 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 NPYP01303 97 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 RIPPLY3P57055 190 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
SNX17-204ENST00000453453 NMUP48645 174 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 ODF1Q14990 250 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 C8orf49Q96NF6 230 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 PRR25Q96S07 402 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 TPPP3Q9BW30 176 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 SMAD5-AS1Q9Y6J3 95 aa11.93□□□□□ -0.5
SNX17-204ENST00000453453 PRSS47A8MTI9 375 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 PCP2Q8IVA1 136 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 DYNLRB2Q8TF09 96 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 C17orf77Q96MU5 243 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 VGLL1Q99990 258 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 CHAC1Q9BUX1 264 aa11.92□□□□□ -0.5
SNX17-204ENST00000453453 F8W1H4 67 aa11.91□□□□□ -0.5
SNX17-204ENST00000453453 IGKCP01834 107 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms