RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	AGPAT4-IT1	Q9H0P7	198 aa		4.61	□□□□□ -1.67
HDLBP-222	ENST00000449504	COMMD3	Q9UBI1	195 aa		4.61	□□□□□ -1.67
HDLBP-222	ENST00000449504	PXMP4	Q9Y6I8	212 aa		4.61	□□□□□ -1.67
HDLBP-222	ENST00000449504	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.61	□□□□□ -1.67
HDLBP-222	ENST00000449504	LPA	P08519	4548 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	TRAV8-1	A0A0A6YYK1	113 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	TRAV4	A0A0B4J268	109 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	KANTR	A0A1W2PQU2	76 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	PRSS46	E5RG02	174 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504		H3BP45	60 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504		H3BQ15	152 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	PANO1	I0J062	215 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504		M0R3E3	92 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	PLP1	P60201	277 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	RPP30	P78346	268 aa	Known RBP	4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	VWC2	Q2TAL6	325 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	PRR9	Q5T870	116 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	FAAP20	Q6NZ36	180 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	ALKAL2	Q6UX46	152 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	LINC00305	Q7Z4B0	112 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	KCNRG	Q8N5I3	272 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	C20orf85	Q9H1P6	137 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504	RNF24	Q9Y225	148 aa		4.6	□□□□□ -1.67
HDLBP-222	ENST00000449504		A0A0B4J2A0	478 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504		A0A0J9YXV3	536 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	DLEU1	O43261	78 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	BCL2L11	O43521	198 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	PITX3	O75364	302 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	MED6	O75586	246 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	FGF7	P21781	194 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	FAU	P35544	74 aa	Known RBP	4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	KRTAP10-8	P60410	259 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	SELENOT	P62341	195 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	RHEB	Q15382	184 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	SMIM15	Q7Z3B0	74 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	OR52I2	Q8NH67	350 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	SMIM4	Q8WVI0	70 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	RASL10A	Q92737	203 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	HIST1H2BA	Q96A08	127 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	GTSF1L	Q9H1H1	148 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	SMDT1	Q9H4I9	107 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	SHPK	Q9UHJ6	478 aa		4.59	□□□□□ -1.67
HDLBP-222	ENST00000449504	ARPC5	O15511	151 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	COX7A2P2	O60397	106 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	IGLC2	P0DOY2	106 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	GATA1	P15976	413 aa	Predicted RBP	4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	TBP	P20226	339 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	RAB5A	P20339	215 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	SSBP1	Q04837	148 aa	Known RBP	4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	SLC38A11	Q08AI6	406 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	TMEM183B	Q1AE95	376 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	C14orf177	Q52M58	125 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	PYY3	Q5JQD4	70 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	CBLN2	Q8IUK8	224 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	TMEM183A	Q8IXX5	376 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	ZFAND2A	Q8N6M9	145 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	SLC25A29	Q8N8R3	303 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	OR51S1	Q8NGJ8	323 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	UBE2W	Q96B02	151 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	FAM19A4	Q96LR4	140 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	PRADC1	Q9BSG0	188 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	SPX	Q9BT56	116 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	UQCC1	Q9NVA1	299 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	KLK12	Q9UKR0	248 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	GPR132	Q9UNW8	380 aa		4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	STRAP	Q9Y3F4	350 aa	Known RBP	4.58	□□□□□ -1.68
HDLBP-222	ENST00000449504	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	IGHV3-73	A0A0B4J1V6	119 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504		M0R143	59 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	GOSR2	O14653	212 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	SYNGR2	O43760	224 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	NDUFB6	O95139	128 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	SIX6	O95475	246 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	IGKV2D-40	P01614	121 aa	Predicted RBP	4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	OR10J4	P0C629	311 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	TPT1	P13693	172 aa	Known RBP	4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	CRISP2	P16562	243 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	CAV2	P51636	162 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	TAS2R19	P59542	299 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	TMEM78	Q5T7P6	136 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	WDR73	Q6P4I2	378 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	TMEM229B	Q8NBD8	167 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	ZC2HC1A	Q96GY0	325 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	C2orf50	Q96LR7	162 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	CIB3	Q96Q77	187 aa	Predicted RBP	4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	MTFP1	Q9UDX5	166 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	URGCP-MRPS24	S4R325	110 aa		4.57	□□□□□ -1.68
HDLBP-222	ENST00000449504	C5orf51	A6NDU8	294 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	FBLL1	A6NHQ2	334 aa	Known RBP	4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	PRSS47	A8MTI9	375 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	PHOX2A	O14813	284 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	PPP1R2P9	O14990	202 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	AGPAT2	O15120	278 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	GCG	P01275	180 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	RPS20	P60866	119 aa	Known RBP	4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	UBE2M	P61081	183 aa	Known RBP	4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	SURF2	Q15527	256 aa	Predicted RBP	4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	RHOH	Q15669	191 aa		4.56	□□□□□ -1.68
HDLBP-222	ENST00000449504	GUK1	Q16774	197 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms