RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 CNBPP62633 177 aaKnown RBP4.59□□□□□ -1.67
RBM39-218ENST00000449489 GAGE1Q13065 139 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 GAGE4Q13068 117 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 NEDD8Q15843 81 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 CLVS1Q8IUQ0 354 aaPredicted RBP4.59□□□□□ -1.67
RBM39-218ENST00000449489 SMIM4Q8WVI0 70 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 AP3S1Q92572 193 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 UBE2WQ96B02 151 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 DNAJC30Q96LL9 226 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 ATP5SQ99766 215 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 PLAC8Q9NZF1 115 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 TIMM9Q9Y5J7 89 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 KIF25-AS1Q9Y6Z4 181 aa4.59□□□□□ -1.67
RBM39-218ENST00000449489 A0A087WYN8 130 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 PHOX2AO14813 284 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 CTDSPLO15194 276 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 FGF8P55075 233 aaPredicted RBP4.58□□□□□ -1.68
RBM39-218ENST00000449489 LSM3P62310 102 aaKnown RBP4.58□□□□□ -1.68
RBM39-218ENST00000449489 ZNF876PQ49A33 203 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 EXOC3-AS1Q8N2X6 119 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 NRACQ8N912 160 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 DYNC2LI1Q8TCX1 351 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 SPACA4Q8TDM5 124 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 TMED6Q8WW62 240 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 URB1-AS1Q96HZ7 61 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 KCNS1Q96KK3 526 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 MGST2Q99735 147 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 RABL2AQ9UBK7 228 aaPredicted RBP4.58□□□□□ -1.68
RBM39-218ENST00000449489 VAX2Q9UIW0 290 aa4.58□□□□□ -1.68
RBM39-218ENST00000449489 A0A087WX48 190 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 ANKRD20A5PA0PJZ0 165 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 C5orf51A6NDU8 294 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 TAAR5O14804 337 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 GNRH2O43555 120 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 TSC22D2O75157 780 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 METTL15P1P0C7V9 234 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 RPL29P47914 159 aaKnown RBP4.57□□□□□ -1.68
RBM39-218ENST00000449489 CAMLGP49069 296 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 PRR3P79522 188 aaKnown RBP4.57□□□□□ -1.68
RBM39-218ENST00000449489 ZFP2Q6ZN57 461 aa4.57□□□□□ -1.68
RBM39-218ENST00000449489 TRAV21A0A0B4J279 112 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 PGPA6NDG6 321 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 CTDSP2O14595 271 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 VCYO14598 125 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 TYMSP04818 313 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 SRSF9Q13242 221 aaKnown RBP eCLIP4.56□□□□□ -1.68
RBM39-218ENST00000449489 CTF1Q16619 201 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 KCNIP4Q6PIL6 250 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 ENHOQ6UWT2 76 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 Q8TAT8 98 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 LINC00479Q96M42 142 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 GPN1Q9HCN4 374 aaPredicted RBP4.56□□□□□ -1.68
RBM39-218ENST00000449489 SDF2L1Q9HCN8 221 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
RBM39-218ENST00000449489 IGHV3-64A0A075B6Q5 118 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 SSSCA1O60232 199 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 SFT2D2O95562 160 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 NBEAP1P0C6P0 100 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 SMIM18P0DKX4 95 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 PYYP10082 97 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 CSN1S1P47710 185 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 NCS1P62166 190 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 ARL16Q0P5N6 197 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 GAGE5Q13069 117 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 MIAQ16674 131 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 NRARPQ7Z6K4 114 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 DPH3Q96FX2 82 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 Q9H521 79 aa4.55□□□□□ -1.68
RBM39-218ENST00000449489 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
RBM39-218ENST00000449489 IGHV3-73A0A0B4J1V6 119 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 CRPP02741 224 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 PRSS2P07478 247 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
RBM39-218ENST00000449489 VBP1P61758 197 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 MIC13Q5XKP0 118 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 OR10G7Q8NGN6 311 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 ASB13Q8WXK3 278 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 C9orf85Q96MD7 179 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 SOSTQ9BQB4 213 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 SLC25A21Q9BQT8 299 aaPredicted RBP4.54□□□□□ -1.68
RBM39-218ENST00000449489 C20orf85Q9H1P6 137 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 MIXL1Q9H2W2 232 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 MCUBQ9NWR8 336 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 NAGKQ9UJ70 344 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 WDR83OSQ9Y284 106 aa4.54□□□□□ -1.68
RBM39-218ENST00000449489 A8MWV9 139 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 CCSO14618 274 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 CAV2P51636 162 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 ZNF506Q5JVG8 444 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 UFSP1Q6NVU6 142 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 KRTAP26-1Q6PEX3 210 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 ARL6IP6Q8N6S5 226 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 PRR26Q8N8Z3 221 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 FAM167A-AS1Q96KT0 104 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 SLC25A2Q9BXI2 301 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 PARLQ9H300 379 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 PRR34Q9NV39 138 aa4.53□□□□□ -1.68
RBM39-218ENST00000449489 C7orf66A4D0T2 115 aa4.52□□□□□ -1.69
RBM39-218ENST00000449489 FAM231BA6NCW3 169 aa4.52□□□□□ -1.69
RBM39-218ENST00000449489 HLA-DQA1P01909 254 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms