RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SNRPD3P62318 126 aaKnown RBP12.05□□□□□ -0.48
AP000253.1-201ENST00000449339 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
AP000253.1-201ENST00000449339 C4orf3Q8WVX3 66 aa12.05□□□□□ -0.48
AP000253.1-201ENST00000449339 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
AP000253.1-201ENST00000449339 KLLNB2CW77 178 aa12.04□□□□□ -0.48
AP000253.1-201ENST00000449339 LINC01619G3V211 115 aa12.04□□□□□ -0.48
AP000253.1-201ENST00000449339 ASIPP42127 132 aa12.04□□□□□ -0.48
AP000253.1-201ENST00000449339 TMEM208Q9BTX3 173 aa12.04□□□□□ -0.48
AP000253.1-201ENST00000449339 GATA1P15976 413 aaPredicted RBP12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 C21orf62-AS1Q17RA5 79 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 OR1N2Q8NGR9 330 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 UQCR10Q9UDW1 63 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 A0A1W2PRX2 142 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 K7EQG2 157 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 RNASE1P07998 156 aaKnown RBP12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 IGLL1P15814 213 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 FXYD7P58549 80 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 DPF1Q92782 380 aa12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 MCRIP2Q9BUT9 160 aaKnown RBP12.03□□□□□ -0.48
AP000253.1-201ENST00000449339 HBDP02042 147 aa12.02□□□□□ -0.48
AP000253.1-201ENST00000449339 CD28P10747 220 aa12.02□□□□□ -0.48
AP000253.1-201ENST00000449339 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.48
AP000253.1-201ENST00000449339 M0R381 172 aa12.02□□□□□ -0.49
AP000253.1-201ENST00000449339 GNRH2O43555 120 aa12.02□□□□□ -0.49
AP000253.1-201ENST00000449339 PHLDA3Q9Y5J5 127 aa12.02□□□□□ -0.49
AP000253.1-201ENST00000449339 WNK1Q9H4A3 2382 aa12.02□□□□□ -0.49
AP000253.1-201ENST00000449339 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 DLX4Q92988 240 aaPredicted RBP12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 AGRNO00468 2067 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 A0A0J9YX75 114 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 SPRY2O43597 315 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 MED14OSP0DP75 135 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 LINC01545Q5VT33 79 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 OR2K2Q8NGT1 345 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 SCRT2Q9NQ03 307 aa12.01□□□□□ -0.49
AP000253.1-201ENST00000449339 LINC01546A6NGU7 62 aa12□□□□□ -0.49
AP000253.1-201ENST00000449339 ZNF418Q8TF45 676 aaPredicted RBP12□□□□□ -0.49
AP000253.1-201ENST00000449339 TMEM160Q9NX00 188 aa12□□□□□ -0.49
AP000253.1-201ENST00000449339 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
AP000253.1-201ENST00000449339 RNASE3P12724 160 aaKnown RBP11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 HILS1P60008 231 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 FAM159AQ6UWV7 190 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 Q6ZN92 141 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 PMCHL2Q9BQD1 86 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 SCGB2A2Q13296 93 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 NRACQ8N912 160 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 OR9G4Q8NGQ1 327 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 ODF3Q96PU9 254 aa11.99□□□□□ -0.49
AP000253.1-201ENST00000449339 TRAV12-3A0A0B4J271 114 aa11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 hDV102S1A0JD36 115 aa11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 IGKV3-20P01619 116 aa11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 CITED2Q99967 270 aaPredicted RBP11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 NPSP0C0P6 89 aa11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 LEPP41159 167 aa11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 ST20Q9HBF5 79 aa11.98□□□□□ -0.49
AP000253.1-201ENST00000449339 C7orf71A4D174 169 aa11.97□□□□□ -0.49
AP000253.1-201ENST00000449339 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
AP000253.1-201ENST00000449339 Q8N8P6 123 aa11.97□□□□□ -0.49
AP000253.1-201ENST00000449339 MRAP2Q96G30 205 aa11.97□□□□□ -0.49
AP000253.1-201ENST00000449339 C16orf95Q9H693 158 aa11.97□□□□□ -0.49
AP000253.1-201ENST00000449339 IGLV2-18A0A075B6J9 118 aa11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 PRSS47A8MTI9 375 aa11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 HNRNPA3P51991 378 aaKnown RBP11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 DEFB125Q8N687 156 aa11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 C14orf178Q8N769 122 aaPredicted RBP11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 PEMTQ9UBM1 199 aa11.96□□□□□ -0.49
AP000253.1-201ENST00000449339 HIVEP1P15822 2718 aa11.96□□□□□ -0.5
AP000253.1-201ENST00000449339 TRAV12-2A0A075B6T6 113 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 FCER1GP30273 86 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 TSPOP30536 169 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 IFI27L1Q96BM0 104 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 CDKN1BP46527 198 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 TMEM61Q8N0U2 210 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 AP1S3Q96PC3 154 aa11.95□□□□□ -0.5
AP000253.1-201ENST00000449339 NSD1Q96L73 2696 aaPredicted RBP11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 DUSP14O95147 198 aaKnown RBP11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 CD7P09564 240 aa11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 NXPH4O95158 308 aa11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
AP000253.1-201ENST00000449339 CCL24O00175 119 aa11.93□□□□□ -0.5
AP000253.1-201ENST00000449339 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
AP000253.1-201ENST00000449339 BATFQ16520 125 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 DYNLRB2Q8TF09 96 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 MGPP08493 103 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 FHL3Q13643 280 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 COTL1Q14019 142 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 LAGE3Q14657 143 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 RASL10AQ92737 203 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms