RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ARID2Q68CP9 1835 aa7.13□□□□□ -1.27
NIPBL-202ENST00000448238 TLN2Q9Y4G6 2542 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 ANAPC1Q9H1A4 1944 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 LHFPL1Q86WI0 220 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 NOTCH2Q04721 2471 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 REG4Q9BYZ8 158 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 PRR20EP86478 221 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 PRR20CP86479 221 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 PRR20DP86480 221 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 PRR20BP86481 221 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 PRR20AP86496 221 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 IGKV2D-26A0A0A0MRZ7 120 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 RBAKDNA6NC62 111 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 DEFB112Q30KQ8 113 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 FAM219BQ5XKK7 198 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 C15orf62A8K5M9 175 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 FOXF2Q12947 444 aa7.12□□□□□ -1.27
NIPBL-202ENST00000448238 UBE2D2P62837 147 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 LYPD6Q86Y78 171 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 K7ENP7 123 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 C16orf54Q6UWD8 224 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 CELA3BP08861 270 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 EIF4EBP2Q13542 120 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-202ENST00000448238 TMEM14BQ9NUH8 114 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 MBD3L4A6NDZ8 208 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-202ENST00000448238 MBD3L3A6NE82 208 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-202ENST00000448238 MBD3L5A6NJ08 208 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-202ENST00000448238 TIAF1O95411 115 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 SPART-AS1P0CW21 52 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 SAA4P35542 130 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 WFDC2Q14508 124 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 MBD3L2Q8NHZ7 208 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-202ENST00000448238 LOC101059948A0A1B0GTJ6 334 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 EFNA2O43921 213 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 IGKV1-8A0A0C4DH67 115 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 IGHV1-46P01743 117 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 C10orf55Q5SWW7 151 aa7.11□□□□□ -1.27
NIPBL-202ENST00000448238 FAM110DQ8TAY7 271 aaPredicted RBP7.1□□□□□ -1.27
NIPBL-202ENST00000448238 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 RPP25Q9BUL9 199 aaKnown RBP7.1□□□□□ -1.27
NIPBL-202ENST00000448238 TCL1BO95988 128 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 Q6ZS49 121 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 C16orf74Q96GX8 76 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 LINC00479Q96M42 142 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 C19orf48Q6RUI8 117 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 BTCP35070 178 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 NOP10Q9NPE3 64 aaKnown RBP7.1□□□□□ -1.27
NIPBL-202ENST00000448238 V9GYV3 84 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 ZNF883P0CG24 379 aa7.1□□□□□ -1.27
NIPBL-202ENST00000448238 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 IL17DQ8TAD2 202 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 KLK5Q9Y337 293 aaPredicted RBP7.09□□□□□ -1.27
NIPBL-202ENST00000448238 SMIM10L1P0DMW3 83 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 SMIM10Q96HG1 83 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 TRBV7-3A0A075B6L6 115 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 RNASE13Q5GAN3 156 aaKnown RBP7.09□□□□□ -1.27
NIPBL-202ENST00000448238 Q6P435 159 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 PCP2Q8IVA1 136 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 LRRC75A-AS1Q8N1F1 130 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 SAP25Q8TEE9 199 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 UBE2D4Q9Y2X8 147 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 VOPP1Q96AW1 172 aa7.09□□□□□ -1.27
NIPBL-202ENST00000448238 PATE3B3GLJ2 98 aa7.09□□□□□ -1.28
NIPBL-202ENST00000448238 IGLC6P0CF74 106 aa7.09□□□□□ -1.28
NIPBL-202ENST00000448238 IGLV3-21P80748 117 aaPredicted RBP7.09□□□□□ -1.28
NIPBL-202ENST00000448238 K7EM74 188 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 ZC2HC1AQ96GY0 325 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 COL22A1Q8NFW1 1626 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-202ENST00000448238 LYPD3O95274 346 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 GYPEP15421 78 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 PIFOQ8TCI5 191 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-202ENST00000448238 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
NIPBL-202ENST00000448238 K7EQD1 137 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 Q6ZQT7 251 aa7.08□□□□□ -1.28
NIPBL-202ENST00000448238 PAQR4Q8N4S7 273 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-202ENST00000448238 J3QLI3 93 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
NIPBL-202ENST00000448238 PIK3CD-AS1Q5SR53 167 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 SPACA3Q8IXA5 215 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 LY75O60449 1722 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 IGHV1-18A0A0C4DH31 117 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 RFPL3SP0C7P2 107 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 ZNF491Q8N8L2 437 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 A0A096LPF7 62 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 H3BUA1 57 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 MST1P26927 711 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 C9orf106Q8NAJ2 232 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 A0A1B0GUS0 222 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 SIPA1L3O60292 1781 aaPredicted RBP7.07□□□□□ -1.28
NIPBL-202ENST00000448238 IGFL4Q6B9Z1 124 aa7.07□□□□□ -1.28
NIPBL-202ENST00000448238 PLA2G2AP14555 144 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 BCORQ6W2J9 1755 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms