RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ORM1P02763 201 aa14.77□□□□□ -0.05
HMGA1-205ENST00000447654 ERCC8Q13216 396 aa14.77□□□□□ -0.05
HMGA1-205ENST00000447654 NUP37Q8NFH4 326 aa14.77□□□□□ -0.05
HMGA1-205ENST00000447654 SMIM2Q9BVW6 85 aa14.77□□□□□ -0.05
HMGA1-205ENST00000447654 TRAV25A0A0B4J276 109 aa14.76□□□□□ -0.05
HMGA1-205ENST00000447654 A0A0B4J2C4 111 aa14.76□□□□□ -0.05
HMGA1-205ENST00000447654 ZNF80P51504 273 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-205ENST00000447654 BAALCQ8WXS3 180 aa14.76□□□□□ -0.05
HMGA1-205ENST00000447654 RNF125Q96EQ8 232 aa14.76□□□□□ -0.05
HMGA1-205ENST00000447654 RPS28P62857 69 aaKnown RBP14.75□□□□□ -0.05
HMGA1-205ENST00000447654 ZNF491Q8N8L2 437 aa14.75□□□□□ -0.05
HMGA1-205ENST00000447654 IGHV3-33P01772 117 aa14.75□□□□□ -0.05
HMGA1-205ENST00000447654 ATP5G1P05496 136 aa14.75□□□□□ -0.05
HMGA1-205ENST00000447654 TMEM101Q96IK0 257 aa14.75□□□□□ -0.05
HMGA1-205ENST00000447654 TPRP12270 2363 aaKnown RBP14.75□□□□□ -0.05
HMGA1-205ENST00000447654 IGHV4-4A0A075B6R2 117 aa14.74□□□□□ -0.05
HMGA1-205ENST00000447654 DEFB121Q5J5C9 76 aa14.74□□□□□ -0.05
HMGA1-205ENST00000447654 TPSG1Q9NRR2 321 aa14.74□□□□□ -0.05
HMGA1-205ENST00000447654 IGHV3-21A0A0B4J1V1 117 aa14.74□□□□□ -0.05
HMGA1-205ENST00000447654 NDUFA7O95182 113 aa14.74□□□□□ -0.05
HMGA1-205ENST00000447654 CRYGBP07316 175 aa14.74□□□□□ -0.05
HMGA1-205ENST00000447654 LINC00694P0DN24 101 aa14.73□□□□□ -0.05
HMGA1-205ENST00000447654 CRIP2P52943 208 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-205ENST00000447654 TMEM155Q4W5P6 130 aa14.73□□□□□ -0.05
HMGA1-205ENST00000447654 IGKV2-40A0A087WW87 121 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-205ENST00000447654 IGKV2D-40P01614 121 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-205ENST00000447654 C3orf22Q8N5N4 141 aa14.73□□□□□ -0.05
HMGA1-205ENST00000447654 CHCHD5Q9BSY4 110 aa14.73□□□□□ -0.05
HMGA1-205ENST00000447654 H3BT86 120 aa14.72□□□□□ -0.05
HMGA1-205ENST00000447654 UQCRQO14949 82 aa14.72□□□□□ -0.05
HMGA1-205ENST00000447654 TRPT1Q86TN4 253 aaKnown RBP14.72□□□□□ -0.05
HMGA1-205ENST00000447654 SLC50A1Q9BRV3 221 aa14.72□□□□□ -0.05
HMGA1-205ENST00000447654 ABCA4P78363 2273 aa14.72□□□□□ -0.05
HMGA1-205ENST00000447654 ARFGEF3Q5TH69 2177 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 TEX22C9J3V5 150 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 EBI3Q14213 229 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 EPG5Q9HCE0 2579 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 SVEP1Q4LDE5 3571 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 ANKHD1Q8IWZ3 2542 aaKnown RBP14.71□□□□□ -0.05
HMGA1-205ENST00000447654 HRNRQ86YZ3 2850 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-205ENST00000447654 TEX49A0A1B0GTD5 131 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 C17orf100A8MU93 164 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 TGFAP01135 160 aa14.71□□□□□ -0.05
HMGA1-205ENST00000447654 TMEM263Q8WUH6 116 aaKnown RBP14.71□□□□□ -0.05
HMGA1-205ENST00000447654 ACACBO00763 2458 aa14.71□□□□□ -0.06
HMGA1-205ENST00000447654 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-205ENST00000447654 NPFFO15130 113 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 TMEM170BQ5T4T1 132 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 TEX36Q5VZQ5 186 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 ITPR1Q14643 2758 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 TRBV30A0A0K0K1B3 111 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 RPL7P18124 248 aaKnown RBP14.7□□□□□ -0.06
HMGA1-205ENST00000447654 OR13C6PQ8NH95 151 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 LINC00526Q96FQ7 95 aa14.7□□□□□ -0.06
HMGA1-205ENST00000447654 ACYP1P07311 99 aa14.69□□□□□ -0.06
HMGA1-205ENST00000447654 C9orf153Q5TBE3 101 aa14.69□□□□□ -0.06
HMGA1-205ENST00000447654 CTSZQ9UBR2 303 aa14.69□□□□□ -0.06
HMGA1-205ENST00000447654 ASH1LQ9NR48 2969 aaKnown RBP14.69□□□□□ -0.06
HMGA1-205ENST00000447654 MSRB2Q9Y3D2 182 aa14.68□□□□□ -0.06
HMGA1-205ENST00000447654 TRGV3P03979 118 aa14.67□□□□□ -0.06
HMGA1-205ENST00000447654 POM121L12Q8N7R1 296 aa14.67□□□□□ -0.06
HMGA1-205ENST00000447654 KLHL30-AS1Q8NEE0 82 aa14.67□□□□□ -0.06
HMGA1-205ENST00000447654 RBAKDNA6NC62 111 aa14.67□□□□□ -0.06
HMGA1-205ENST00000447654 E7EQL1 145 aa14.67□□□□□ -0.06
HMGA1-205ENST00000447654 ZNF56Q15929 161 aa14.67□□□□□ -0.06
HMGA1-205ENST00000447654 COL6A6A6NMZ7 2263 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 IGHV1-69DA0A0B4J2H0 117 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 TMEM219Q86XT9 240 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 Q8TAT8 98 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 C11orf86A6NJI1 115 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 K7EIM0 57 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 PF4V1P10720 104 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 GRNP28799 593 aaKnown RBP14.66□□□□□ -0.06
HMGA1-205ENST00000447654 SUMO2P61956 95 aaKnown RBP14.66□□□□□ -0.06
HMGA1-205ENST00000447654 LYPD2Q6UXB3 125 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 C2orf66Q6UXQ4 117 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 CCL17Q92583 94 aa14.66□□□□□ -0.06
HMGA1-205ENST00000447654 CSMD1Q96PZ7 3565 aa14.65□□□□□ -0.06
HMGA1-205ENST00000447654 CCL3L1P16619 93 aa14.65□□□□□ -0.06
HMGA1-205ENST00000447654 C2orf82Q6UX34 121 aa14.65□□□□□ -0.06
HMGA1-205ENST00000447654 FAM19A5Q7Z5A7 132 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-205ENST00000447654 A4D1N5 150 aa14.64□□□□□ -0.07
HMGA1-205ENST00000447654 TMEM178BH3BS89 294 aa14.64□□□□□ -0.07
HMGA1-205ENST00000447654 HERVK_113P63121 156 aa14.64□□□□□ -0.07
HMGA1-205ENST00000447654 CDSNQ15517 529 aa14.64□□□□□ -0.07
HMGA1-205ENST00000447654 Q6ZS46 218 aa14.64□□□□□ -0.07
HMGA1-205ENST00000447654 RNASE6Q93091 150 aaKnown RBP14.64□□□□□ -0.07
HMGA1-205ENST00000447654 ENSAO43768 121 aaKnown RBP14.63□□□□□ -0.07
HMGA1-205ENST00000447654 CD3EP07766 207 aa14.63□□□□□ -0.07
HMGA1-205ENST00000447654 M0R381 172 aa14.63□□□□□ -0.07
HMGA1-205ENST00000447654 PPP1R17O96001 155 aa14.63□□□□□ -0.07
HMGA1-205ENST00000447654 IGLV4-69A0A075B6H9 119 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 IGKV3D-20A0A0C4DH25 116 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 IGHV7-4-1A0A0J9YVY3 117 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 FAM236AA0A1B0GUQ0 79 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 FAM236BA0A1B0GV22 79 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 TMEM200BQ69YZ2 307 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 LINC01560Q8TB33 94 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 CFHR4Q92496 578 aa14.62□□□□□ -0.07
HMGA1-205ENST00000447654 AMELXQ99217 191 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms