RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ATP5G1P05496 136 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 LINC01551Q86U37 167 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 POM121L12Q8N7R1 296 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 LYSTQ99698 3801 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 DNAH1Q9P2D7 4330 aa9.34□□□□□ -0.91
HLA-DOB-207ENST00000447394 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 TMEM88Q6PEY1 159 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 COMMD7Q86VX2 200 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 RASL10AQ92737 203 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 JPT2Q9H910 190 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
HLA-DOB-207ENST00000447394 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 SSTP61278 116 aa9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 RPL23P62829 140 aaKnown RBP9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 ADIRFQ15847 76 aa9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 SOHLH1Q5JUK2 328 aa9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 OR10AG1Q8NH19 301 aa9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
HLA-DOB-207ENST00000447394 IGHV3-73A0A0B4J1V6 119 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 A0A0J9YY99 117 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 M0R381 172 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 TMEM241Q24JQ0 296 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 TPPP3Q9BW30 176 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 SCRT2Q9NQ03 307 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 BIN3Q9NQY0 253 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 NAT8Q9UHE5 227 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
HLA-DOB-207ENST00000447394 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 IGLC6P0CF74 106 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 ERVFC1-1P60608 527 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 CFAP126Q5VTH2 177 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 ISOC2Q96AB3 205 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 SAMD10Q9BYL1 202 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 HYDINQ4G0P3 5121 aa9.3□□□□□ -0.92
HLA-DOB-207ENST00000447394 SACSQ9NZJ4 4579 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 TRAV26-1A0A087WT03 109 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 LINC00862A6NCI5 91 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 RS1O15537 224 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 SNAI2O43623 268 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 GATCO43716 136 aaKnown RBP9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 CXCL1P09341 107 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 FHL2Q14192 279 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 FER1L6-AS1Q8NA97 138 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 OR4C5Q8NGB2 326 aa9.29□□□□□ -0.92
HLA-DOB-207ENST00000447394 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 PTH2Q96A98 100 aa9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 VPS13DQ5THJ4 4388 aa9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 RYR2Q92736 4967 aa9.28□□□□□ -0.92
HLA-DOB-207ENST00000447394 A0A087WWL8 130 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 NXPH4O95158 308 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 OR5AL1P0C617 328 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 Q6ZSN1 163 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 ZFP82Q8N141 532 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 SYT8Q8NBV8 401 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 SFRP2Q96HF1 295 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 NDUFAF3Q9BU61 184 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 MSRB1Q9NZV6 116 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 V9GYV3 84 aa9.27□□□□□ -0.93
HLA-DOB-207ENST00000447394 LOC100131303A0A0U1RQF7 123 aa9.26□□□□□ -0.93
HLA-DOB-207ENST00000447394 NUDT3O95989 172 aa9.26□□□□□ -0.93
HLA-DOB-207ENST00000447394 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
HLA-DOB-207ENST00000447394 SPANXN1Q5VSR9 72 aa9.26□□□□□ -0.93
HLA-DOB-207ENST00000447394 UQCC3Q6UW78 93 aa9.26□□□□□ -0.93
HLA-DOB-207ENST00000447394 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
HLA-DOB-207ENST00000447394 TMEM218A2RU14 115 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 XKRY2A2RUG3 117 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 CTRLP40313 264 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 CRYBA4P53673 196 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 UFSP1Q6NVU6 142 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
HLA-DOB-207ENST00000447394 A8MWV9 139 aa9.24□□□□□ -0.93
HLA-DOB-207ENST00000447394 PAX4O43316 350 aa9.24□□□□□ -0.93
HLA-DOB-207ENST00000447394 CRYGDP07320 174 aa9.24□□□□□ -0.93
HLA-DOB-207ENST00000447394 GATA1P15976 413 aaPredicted RBP9.24□□□□□ -0.93
HLA-DOB-207ENST00000447394 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
HLA-DOB-207ENST00000447394 HHLA3Q9XRX5 114 aa9.24□□□□□ -0.93
HLA-DOB-207ENST00000447394 DNAH6Q9C0G6 4158 aa9.23□□□□□ -0.93
HLA-DOB-207ENST00000447394 A8MWL6 223 aa9.23□□□□□ -0.93
HLA-DOB-207ENST00000447394 F8W036 122 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms