RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 LAMTOR2Q9Y2Q5 125 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 PHLDA3Q9Y5J5 127 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 NIPBLQ6KC79 2804 aaeCLIP12.98□□□□□ -0.335e-6■□□□□ 10.2
SMC6-206ENST00000446852 SETXQ7Z333 2677 aaKnown RBP12.97□□□□□ -0.33
SMC6-206ENST00000446852 MAP1LC3AQ9H492 121 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 HSPB8Q9UJY1 196 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 SPATA45Q537H7 98 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 FAM159AQ6UWV7 190 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 FOXI2Q6ZQN5 318 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 LINC01006Q8NI28 216 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 ZNF747Q9BV97 191 aa12.97□□□□□ -0.33
SMC6-206ENST00000446852 HIVEP2P31629 2446 aa12.96□□□□□ -0.33
SMC6-206ENST00000446852 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.33
SMC6-206ENST00000446852 AMTNQ6UX39 209 aa12.96□□□□□ -0.34
SMC6-206ENST00000446852 NRACQ8N912 160 aa12.96□□□□□ -0.34
SMC6-206ENST00000446852 MAP1LC3CQ9BXW4 147 aa12.96□□□□□ -0.34
SMC6-206ENST00000446852 CDKN1BP46527 198 aa12.95□□□□□ -0.34
SMC6-206ENST00000446852 OR2K2Q8NGT1 345 aa12.95□□□□□ -0.34
SMC6-206ENST00000446852 DUSP14O95147 198 aaKnown RBP12.95□□□□□ -0.34
SMC6-206ENST00000446852 FHL3Q13643 280 aa12.95□□□□□ -0.34
SMC6-206ENST00000446852 MCRIP2Q9BUT9 160 aaKnown RBP12.95□□□□□ -0.34
SMC6-206ENST00000446852 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
SMC6-206ENST00000446852 DEFB131AP59861 70 aa12.94□□□□□ -0.34
SMC6-206ENST00000446852 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
SMC6-206ENST00000446852 LINC01546A6NGU7 62 aa12.94□□□□□ -0.34
SMC6-206ENST00000446852 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
SMC6-206ENST00000446852 H0Y8G0 127 aa12.94□□□□□ -0.34
SMC6-206ENST00000446852 CD7P09564 240 aa12.94□□□□□ -0.34
SMC6-206ENST00000446852 ZNF124Q15973 351 aa12.94□□□□□ -0.34
SMC6-206ENST00000446852 C14orf178Q8N769 122 aaPredicted RBP12.94□□□□□ -0.34
SMC6-206ENST00000446852 OR4C46A6NHA9 309 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 NXPH4O95158 308 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 HBDP02042 147 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 HILS1P60008 231 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 SCGB2A2Q13296 93 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 DEFB114Q30KQ6 69 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 DYNLRB2Q8TF09 96 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 MIEN1Q9BRT3 115 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 TMEM160Q9NX00 188 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 IGLV2-18A0A075B6J9 118 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 PET117Q6UWS5 81 aa12.93□□□□□ -0.34
SMC6-206ENST00000446852 ZNF705AQ6ZN79 300 aaPredicted RBP12.93□□□□□ -0.34
SMC6-206ENST00000446852 TRAV9-2A0A087WT02 112 aa12.92□□□□□ -0.34
SMC6-206ENST00000446852 TSPOP30536 169 aa12.92□□□□□ -0.34
SMC6-206ENST00000446852 CD300EQ496F6 205 aaPredicted RBP12.92□□□□□ -0.34
SMC6-206ENST00000446852 ZNF418Q8TF45 676 aaPredicted RBP12.92□□□□□ -0.34
SMC6-206ENST00000446852 DPH3P1Q9H4G8 78 aa12.92□□□□□ -0.34
SMC6-206ENST00000446852 NXT2Q9NPJ8 142 aaKnown RBP12.92□□□□□ -0.34
SMC6-206ENST00000446852 CCL24O00175 119 aa12.91□□□□□ -0.34
SMC6-206ENST00000446852 MRAP2Q96G30 205 aa12.91□□□□□ -0.34
SMC6-206ENST00000446852 C20orf202A1L168 122 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 LINC01545Q5VT33 79 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 PMCHL2Q9BQD1 86 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 IGHV3-16A0A0C4DH30 117 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 PRSS47A8MTI9 375 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 IGLC3P0DOY3 106 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 IGLL1P15814 213 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 DEFB125Q8N687 156 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 Q8N8P6 123 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
SMC6-206ENST00000446852 RBMY1BA6NDE4 496 aaKnown RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 RBMY1EA6NEQ0 496 aaKnown RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 A8MTW9 85 aa12.89□□□□□ -0.35
SMC6-206ENST00000446852 H3BMM0 161 aa12.89□□□□□ -0.35
SMC6-206ENST00000446852 LY6G6DO95868 133 aa12.89□□□□□ -0.35
SMC6-206ENST00000446852 RBMY1DP0C7P1 496 aaKnown RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 Q8N1Y9 231 aa12.89□□□□□ -0.35
SMC6-206ENST00000446852 TSSC4Q9Y5U2 329 aaPredicted RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 NSD1Q96L73 2696 aaPredicted RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 RBMY1A1P0DJD3 496 aaKnown RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 RBMY1CP0DJD4 496 aa12.89□□□□□ -0.35
SMC6-206ENST00000446852 RBMY1FQ15415 496 aaKnown RBP12.89□□□□□ -0.35
SMC6-206ENST00000446852 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 MGPP08493 103 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 RASL10AQ92737 203 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 JPT2Q9H910 190 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
SMC6-206ENST00000446852 KIF25-AS1Q9Y6Z4 181 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 EREGO14944 169 aa12.88□□□□□ -0.35
SMC6-206ENST00000446852 hDV102S1A0JD36 115 aa12.87□□□□□ -0.35
SMC6-206ENST00000446852 LINC00315P59091 139 aa12.87□□□□□ -0.35
SMC6-206ENST00000446852 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
SMC6-206ENST00000446852 FCER1GP30273 86 aa12.87□□□□□ -0.35
SMC6-206ENST00000446852 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
SMC6-206ENST00000446852 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
SMC6-206ENST00000446852 SNHG12Q9BXW3 62 aa12.86□□□□□ -0.35
SMC6-206ENST00000446852 UQCR10Q9UDW1 63 aa12.86□□□□□ -0.35
SMC6-206ENST00000446852 TCAPO15273 167 aa12.85□□□□□ -0.35
SMC6-206ENST00000446852 TMEM158Q8WZ71 300 aa12.85□□□□□ -0.35
SMC6-206ENST00000446852 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
SMC6-206ENST00000446852 C18orf15Q96N68 181 aa12.85□□□□□ -0.35
SMC6-206ENST00000446852 SMIM2Q9BVW6 85 aa12.85□□□□□ -0.35
SMC6-206ENST00000446852 NDUFA7O95182 113 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms