RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 LINC00173Q6ZV60 143 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 OR9G4Q8NGQ1 327 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 SIGLEC8Q9NYZ4 499 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 PEMTQ9UBM1 199 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 U3KQK5 164 aa7.13□□□□□ -1.27
COL6A4P1-201ENST00000446690 TRAV12-2A0A075B6T6 113 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 H0Y8G0 127 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 NPYP01303 97 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 OR5AL1P0C617 328 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 CD28P10747 220 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 FXYD7P58549 80 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 FLNAP21333 2647 aaKnown RBP7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 A0A0J9YX75 114 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 CBY3A6NI87 242 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 FAM159AQ6UWV7 190 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 PHLDA3Q9Y5J5 127 aa7.12□□□□□ -1.27
COL6A4P1-201ENST00000446690 AKAP9Q99996 3911 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 CACNG7P62955 275 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 VAMP3Q15836 100 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 DYNLRB2Q8TF09 96 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 TRBV7-9A0A0J9YWB2 115 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 KLLNB2CW77 178 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 SNAI2O43623 268 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 SPINK13Q1W4C9 94 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 OCIAD2Q56VL3 154 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 ZNF418Q8TF45 676 aaPredicted RBP7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 TMEM70Q9BUB7 260 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 CST9LQ9H4G1 147 aa7.11□□□□□ -1.27
COL6A4P1-201ENST00000446690 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 IGLL1P15814 213 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 LEPP41159 167 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 DEFB131AP59861 70 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 SCGB2A2Q13296 93 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 APRG1Q8IVJ8 170 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 MCRIP2Q9BUT9 160 aaKnown RBP7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 MAP1LC3AQ9H492 121 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 ITPR2Q14571 2701 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 C7orf71A4D174 169 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 CD7P09564 240 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 ERASQ7Z444 233 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 SPATA12Q7Z6I5 190 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 TMEM61Q8N0U2 210 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 LINC01006Q8NI28 216 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 MAP1LC3CQ9BXW4 147 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 HSPB8Q9UJY1 196 aa7.1□□□□□ -1.27
COL6A4P1-201ENST00000446690 IGHV4-4A0A075B6R2 117 aa7.09□□□□□ -1.27
COL6A4P1-201ENST00000446690 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
COL6A4P1-201ENST00000446690 RNASE3P12724 160 aaKnown RBP7.09□□□□□ -1.27
COL6A4P1-201ENST00000446690 C14orf178Q8N769 122 aaPredicted RBP7.09□□□□□ -1.27
COL6A4P1-201ENST00000446690 ACANP16112 2415 aa7.09□□□□□ -1.27
COL6A4P1-201ENST00000446690 CCL24O00175 119 aa7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 TAX1BP3O14907 124 aa7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 DUSP14O95147 198 aaKnown RBP7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 LY6G6DO95868 133 aa7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 FOXI2Q6ZQN5 318 aa7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 CSTL1Q9H114 145 aa7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 TP73-AS1Q9UF72 201 aa7.09□□□□□ -1.28
COL6A4P1-201ENST00000446690 UNC79Q9P2D8 2635 aa7.08□□□□□ -1.28
COL6A4P1-201ENST00000446690 MGPP08493 103 aa7.08□□□□□ -1.28
COL6A4P1-201ENST00000446690 HTN1P15515 57 aa7.08□□□□□ -1.28
COL6A4P1-201ENST00000446690 CD300EQ496F6 205 aaPredicted RBP7.08□□□□□ -1.28
COL6A4P1-201ENST00000446690 OR2K2Q8NGT1 345 aa7.08□□□□□ -1.28
COL6A4P1-201ENST00000446690 DEFB114Q30KQ6 69 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 MPV17L2Q567V2 206 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 PMCHL2Q9BQD1 86 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 OR4C46A6NHA9 309 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 HILS1P60008 231 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 ODF3Q96PU9 254 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 SCRT2Q9NQ03 307 aa7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 TSSC4Q9Y5U2 329 aaPredicted RBP7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 FASNP49327 2511 aaKnown RBP7.07□□□□□ -1.28
COL6A4P1-201ENST00000446690 A0A096LNJ9 63 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 C16orf95Q9H693 158 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 MDFICQ9P1T7 246 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 MYO9AB2RTY4 2548 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 HBDP02042 147 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 MED14OSP0DP75 135 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 BVES-AS1Q5T3Y7 98 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 Q8N1Y9 231 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 DEFB125Q8N687 156 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 DPH3P1Q9H4G8 78 aa7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
COL6A4P1-201ENST00000446690 HECTD1Q9ULT8 2610 aa7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 CRXO43186 299 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 SMIM17P0DL12 118 aa7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 NSUN5P1Q3KNT7 163 aa7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 NRACQ8N912 160 aa7.05□□□□□ -1.28
COL6A4P1-201ENST00000446690 C18orf15Q96N68 181 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms