RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 ERCC8Q13216 396 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 Q1RN00 199 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 CEMP1Q6PRD7 247 aaPredicted RBP4.44□□□□□ -1.7
MCF2-206ENST00000446225 LINC00337Q8N6G1 96 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 OR5H2Q8NGV7 314 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 LINC01587Q99440 93 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 MED9Q9NWA0 146 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 LOC389332A0A1B0GUA5 103 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 ZNF705GA8MUZ8 300 aaPredicted RBP4.43□□□□□ -1.7
MCF2-206ENST00000446225 H0YJW9 148 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 GABARAPH6UMI1 98 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 PPYP01298 95 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 NDUFA6P56556 154 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 FXYD4P59646 89 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 KRTAP10-3P60369 221 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 MEF2BQ02080 365 aaPredicted RBP4.43□□□□□ -1.7
MCF2-206ENST00000446225 HSD52Q0P140 79 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 DHRS2Q13268 280 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 ABCA11PQ4W5N1 156 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 LYRM7Q5U5X0 104 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 ZNF660Q6AZW8 331 aaPredicted RBP4.43□□□□□ -1.7
MCF2-206ENST00000446225 OR51H1Q8NH63 302 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 C15orf40Q8WUR7 153 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 RBPMSQ93062 196 aaKnown RBP4.43□□□□□ -1.7
MCF2-206ENST00000446225 COMMD5Q9GZQ3 224 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 CYSLTR1Q9Y271 337 aa4.43□□□□□ -1.7
MCF2-206ENST00000446225 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 J3QQQ9 107 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 SNAPC5O75971 98 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 CD3DP04234 171 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 IGKV1-16P04430 117 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 IGLC6P0CF74 106 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 RPL30P62888 115 aaKnown RBP4.42□□□□□ -1.7
MCF2-206ENST00000446225 EIF4EBP1Q13541 118 aaPredicted RBP4.42□□□□□ -1.7
MCF2-206ENST00000446225 LHFPL1Q86WI0 220 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 Q8N2B8 174 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 ZNF645Q8N7E2 425 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 C3orf56Q8N813 242 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 C5orf56Q8N8D9 126 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 Q8N9W7 124 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 OR4C16Q8NGL9 310 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 LINC00527Q9UJ94 153 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 V9GYH0 126 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 ISLRO14498 428 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 GSTZ1O43708 216 aaPredicted RBP4.42□□□□□ -1.7
MCF2-206ENST00000446225 MPC2O95563 127 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 P0DMU3 169 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
MCF2-206ENST00000446225 PYDC2Q56P42 97 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 AMMECR1LQ6DCA0 310 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 PRNTQ86SH4 94 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 SMIM4Q8WVI0 70 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 DEDD2Q8WXF8 326 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 AP1S3Q96PC3 154 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 TAS2R8Q9NYW2 309 aa4.42□□□□□ -1.7
MCF2-206ENST00000446225 PHOX2AO14813 284 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 IGLV2-23P01705 113 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 S100A10P60903 97 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 ZNF79Q15937 498 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 TMEM183BQ1AE95 376 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 AADACL3Q5VUY0 350 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 Q6Q795 121 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 ZNF818PQ6ZRF7 136 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 TMEM183AQ8IXX5 376 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 POM121L12Q8N7R1 296 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 TMEM75Q8N9X5 138 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 OR4C12Q96R67 309 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 FXYD6Q9H0Q3 95 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 ANK2Q01484 3957 aa4.41□□□□□ -1.7
MCF2-206ENST00000446225 IFITM10A6NMD0 228 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 PGLYRP1O75594 196 aaPredicted RBP4.4□□□□□ -1.7
MCF2-206ENST00000446225 OR10J1P30954 320 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 ETV6P41212 452 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 MP68P56378 58 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 SSBP1Q04837 148 aaKnown RBP4.4□□□□□ -1.7
MCF2-206ENST00000446225 MSMO1Q15800 293 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 RTL8BQ17RB0 113 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 C10orf99Q6UWK7 81 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 PDPNQ86YL7 162 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 RNF5Q99942 180 aa4.4□□□□□ -1.7
MCF2-206ENST00000446225 SLC25A21Q9BQT8 299 aaPredicted RBP4.4□□□□□ -1.7
MCF2-206ENST00000446225 GGTLC3B5MD39 225 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 NDUFA3O95167 84 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 NCR2O95944 276 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 MT-ND4LP03901 98 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 P0C879 139 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 CD28P10747 220 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 TMEM14EPQ6UXP3 125 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 SLC35E3Q7Z769 313 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 FER1L6-AS1Q8NA97 138 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 FAM104AQ969W3 186 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 IMUPQ9GZP8 106 aa4.4□□□□□ -1.71
MCF2-206ENST00000446225 APOMO95445 188 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 CRISP2P16562 243 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 NMUP48645 174 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms