RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PARLQ9H300 379 aa8.65□□□□□ -1.02
USP1-203ENST00000442679 IL36BQ9NZH7 164 aa8.65□□□□□ -1.02
USP1-203ENST00000442679 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 A0A0J9YY99 117 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 H3BVH4 76 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
USP1-203ENST00000442679 ARMS2P0C7Q2 107 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 RAB14P61106 215 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 RPL19P84098 196 aaKnown RBP8.64□□□□□ -1.03
USP1-203ENST00000442679 LGALS9CQ6DKI2 356 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 C15orf53Q8NAA6 179 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 OR4C5Q8NGB2 326 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 ZNF479Q96JC4 524 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 BIN3Q9NQY0 253 aa8.64□□□□□ -1.03
USP1-203ENST00000442679 TRAV4A0A0B4J268 109 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 TRGV4A0A0C4DH28 118 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 NUDT3O95989 172 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 SRP19P09132 144 aaKnown RBP8.63□□□□□ -1.03
USP1-203ENST00000442679 SFTA3P0C7M3 94 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 SLAQ13239 276 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 FHL2Q14192 279 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 POM121L12Q8N7R1 296 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
USP1-203ENST00000442679 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 RS1O15537 224 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 PEA15Q15121 130 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 SMIM7Q9BQ49 75 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 SCRT2Q9NQ03 307 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
USP1-203ENST00000442679 H3BNG1 76 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 K7EN84 100 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 PAX4O43316 350 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 P01737 135 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 CXCL1P09341 107 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 P0DMU3 169 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 FAM231AP0DMU4 169 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 FAM231CP0DMU5 169 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 SRSF3P84103 164 aaKnown RBP8.61□□□□□ -1.03
USP1-203ENST00000442679 PIK3CD-AS1Q5SR53 167 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 CFAP126Q5VTH2 177 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 OR2D3Q8NGH3 330 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 NUDT11Q96G61 164 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
USP1-203ENST00000442679 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 ZNF727A8MUV8 499 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 C9JQL5 133 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 CRYBA4P53673 196 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
USP1-203ENST00000442679 IFITM2Q01629 132 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 SMDT1Q9H4I9 107 aa8.6□□□□□ -1.03
USP1-203ENST00000442679 IGHV3-73A0A0B4J1V6 119 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 A8MWV9 139 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 M0R381 172 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 CIDEAO60543 219 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 GZMBP10144 247 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 ZFP82Q8N141 532 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 SSBP4Q9BWG4 385 aaPredicted RBP8.59□□□□□ -1.03
USP1-203ENST00000442679 RNASE7Q9H1E1 156 aaKnown RBP8.59□□□□□ -1.03
USP1-203ENST00000442679 LY96Q9Y6Y9 160 aa8.59□□□□□ -1.03
USP1-203ENST00000442679 MUC21A0A0G2JKD1 596 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 MUC21A0A140T8X8 626 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 XKRY2A2RUG3 117 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 GATA1P15976 413 aaPredicted RBP8.58□□□□□ -1.04
USP1-203ENST00000442679 RNF212Q495C1 297 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 FAM74A3Q4VXF1 159 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 CLLU1Q5K131 121 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 TPPP3Q9BW30 176 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 JPT2Q9H910 190 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
USP1-203ENST00000442679 A0A096LPF7 62 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 SNAI2O43623 268 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 SSTP61278 116 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 TMEM241Q24JQ0 296 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 ZFP2Q6ZN57 461 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 SFRP2Q96HF1 295 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 SAMD10Q9BYL1 202 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
USP1-203ENST00000442679 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
USP1-203ENST00000442679 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
USP1-203ENST00000442679 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 GYPEP15421 78 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 CCL18P55774 89 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 ERVFC1-1P60608 527 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 MRPL23Q16540 153 aaKnown RBP8.56□□□□□ -1.04
USP1-203ENST00000442679 SOHLH1Q5JUK2 328 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 FER1L6-AS1Q8NA97 138 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 MUC4Q99102 2169 aa8.56□□□□□ -1.04
USP1-203ENST00000442679 A0A087WWL8 130 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms