RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 HSPB11Q9Y547 144 aa4.73□□□□□ -1.65
RFX3-206ENST00000442560 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 A0A1W2PPV4 95 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 PGPEP1LA6NFU8 196 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 RPL12P30050 165 aaKnown RBP4.72□□□□□ -1.65
RFX3-206ENST00000442560 ZNF80P51504 273 aaPredicted RBP4.72□□□□□ -1.65
RFX3-206ENST00000442560 RAB2AP61019 212 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 ASAH1Q13510 395 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 RHOHQ15669 191 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 ACOT6Q3I5F7 207 aaPredicted RBP4.72□□□□□ -1.65
RFX3-206ENST00000442560 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 TMEM75Q8N9X5 138 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 ATP6V0E2Q8NHE4 81 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 ASB13Q8WXK3 278 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 WFDC1Q9HC57 220 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 NDUFA13Q9P0J0 144 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
RFX3-206ENST00000442560 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.71□□□□□ -1.66
RFX3-206ENST00000442560 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 INMT-MINDY4F8WBC2 141 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 LECT2O14960 151 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 CIDEAO60543 219 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 MPC2O95563 127 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 H2BFSP57053 126 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 GAGE1Q13065 139 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 GAGE4Q13068 117 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 GAGE5Q13069 117 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 ZNF506Q5JVG8 444 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 PQLC2Q6ZP29 291 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 ARL6IP6Q8N6S5 226 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 OR10G9Q8NGN4 311 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 OR10G7Q8NGN6 311 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 NDFIP1Q9BT67 221 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 TM2D2Q9BX73 214 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 GTSF1LQ9H1H1 148 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 PSG8Q9UQ74 426 aa4.71□□□□□ -1.66
RFX3-206ENST00000442560 TAAR5O14804 337 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 GCGP01275 180 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 C1QBP02746 253 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 PLA2G1BP04054 148 aaKnown RBP4.7□□□□□ -1.66
RFX3-206ENST00000442560 MGST1P10620 155 aaKnown RBP4.7□□□□□ -1.66
RFX3-206ENST00000442560 IFITM3Q01628 133 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 LINC01620Q4KN68 170 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 DAZ4Q86SG3 579 aaKnown RBP4.7□□□□□ -1.66
RFX3-206ENST00000442560 S100ZQ8WXG8 99 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 C9orf85Q96MD7 179 aa4.7□□□□□ -1.66
RFX3-206ENST00000442560 DAZ3Q9NR90 486 aaKnown RBP4.7□□□□□ -1.66
RFX3-206ENST00000442560 SERTM2A0A1B0GWG4 89 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 SSNA1O43805 119 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 UPK1BO75841 260 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 TCRAP04437 139 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 STAG3L2P0CL84 134 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 STAG3L3P0CL85 134 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 PET100P0DJ07 73 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 RNASE3P12724 160 aaKnown RBP4.69□□□□□ -1.66
RFX3-206ENST00000442560 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
RFX3-206ENST00000442560 SUMO1P63165 101 aaKnown RBP4.69□□□□□ -1.66
RFX3-206ENST00000442560 LAGE3Q14657 143 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 SMUG1Q53HV7 270 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 Q6ZSA8 131 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 PRNTQ86SH4 94 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 OR2T35Q8NGX2 323 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 BAALCQ8WXS3 180 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 SAMD10Q9BYL1 202 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 PARLQ9H300 379 aa4.69□□□□□ -1.66
RFX3-206ENST00000442560 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 IGKV3D-20A0A0C4DH25 116 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 RBFOX3A6NFN3 312 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
RFX3-206ENST00000442560 GGTLC3B5MD39 225 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 K7EQM0 130 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 IGLV2-11P01706 119 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 S100A4P26447 101 aaKnown RBP4.68□□□□□ -1.66
RFX3-206ENST00000442560 GCHFRP30047 84 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 FLI1Q01543 452 aaPredicted RBP4.68□□□□□ -1.66
RFX3-206ENST00000442560 LGALSLQ3ZCW2 172 aaPredicted RBP4.68□□□□□ -1.66
RFX3-206ENST00000442560 ZFP69Q49AA0 526 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 LINC00299Q6ZSB3 139 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 C5orf17Q8NAS9 161 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 DEFB104AQ8WTQ1 72 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 PTH2Q96A98 100 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 DNAJC30Q96LL9 226 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 MARVELD1Q9BSK0 173 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 JPT2Q9H910 190 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 Q9UF83 564 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 EPDR1Q9UM22 224 aa4.68□□□□□ -1.66
RFX3-206ENST00000442560 A8MWV9 139 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 TOR2AQ5JU69 321 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 SCXQ7RTU7 201 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 C14orf178Q8N769 122 aaPredicted RBP4.67□□□□□ -1.66
RFX3-206ENST00000442560 CYB561D1Q8N8Q1 229 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 HSD17B11Q8NBQ5 300 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 SUN5Q8TC36 379 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 LINC00479Q96M42 142 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 SH3BGRL3Q9H299 93 aa4.67□□□□□ -1.66
RFX3-206ENST00000442560 FAT3Q8TDW7 4589 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms