RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MAP1LC3CQ9BXW4 147 aa9.78□□□□□ -0.84
CPSF4-206ENST00000441580 CELSR1Q9NYQ6 3014 aa9.77□□□□□ -0.84
CPSF4-206ENST00000441580 H3BMM0 161 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 CRXO43186 299 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-206ENST00000441580 IGKV3-20P01619 116 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 DDTP30046 118 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 CMC4P56277 68 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-206ENST00000441580 PET117Q6UWS5 81 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 NDUFA11Q86Y39 141 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 C11orf44Q8N8P7 122 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 SMR3AQ99954 134 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 PRO1933Q9H354 126 aa9.77□□□□□ -0.85
CPSF4-206ENST00000441580 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 KNCNA6PVL3 124 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 PRSS47A8MTI9 375 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 SYS1-DBNDD2H3BUS1 97 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 Q8N8P6 123 aa9.76□□□□□ -0.85
CPSF4-206ENST00000441580 NBPF19A0A087WUL8 3843 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 GNRH2O43555 120 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 INSP01308 110 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 NRACQ8N912 160 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 ZNF256Q9Y2P7 627 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-206ENST00000441580 SONP18583 2426 aaKnown RBP9.75□□□□□ -0.85
CPSF4-206ENST00000441580 TEX15Q9BXT5 2789 aa9.75□□□□□ -0.85
CPSF4-206ENST00000441580 K7EMI3 77 aa9.74□□□□□ -0.85
CPSF4-206ENST00000441580 MGPP08493 103 aa9.74□□□□□ -0.85
CPSF4-206ENST00000441580 DEFA6Q01524 100 aa9.74□□□□□ -0.85
CPSF4-206ENST00000441580 C20orf78Q9BR46 151 aa9.74□□□□□ -0.85
CPSF4-206ENST00000441580 LINC00467Q9BRT7 94 aa9.74□□□□□ -0.85
CPSF4-206ENST00000441580 ZFHX3Q15911 3703 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 ADARB2-AS1A8MUL3 147 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 OR11H12B2RN74 326 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 INAFM1C9JVW0 142 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 Q8N1Y9 231 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 FAM110AQ9BQ89 295 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 NDUFAF3Q9BU61 184 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
CPSF4-206ENST00000441580 FASNP49327 2511 aaKnown RBP9.72□□□□□ -0.85
CPSF4-206ENST00000441580 A0A096LNJ9 63 aa9.72□□□□□ -0.85
CPSF4-206ENST00000441580 RBMY1BA6NDE4 496 aaKnown RBP9.72□□□□□ -0.85
CPSF4-206ENST00000441580 RBMY1EA6NEQ0 496 aaKnown RBP9.72□□□□□ -0.85
CPSF4-206ENST00000441580 SAP30O75446 220 aa9.72□□□□□ -0.85
CPSF4-206ENST00000441580 RBMY1DP0C7P1 496 aaKnown RBP9.72□□□□□ -0.85
CPSF4-206ENST00000441580 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
CPSF4-206ENST00000441580 SPATA45Q537H7 98 aa9.72□□□□□ -0.85
CPSF4-206ENST00000441580 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-206ENST00000441580 HIVEP2P31629 2446 aa9.72□□□□□ -0.85
CPSF4-206ENST00000441580 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 TRAV26-2A0A0B4J265 109 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 CBY3A6NI87 242 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 FCER1GP30273 86 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.86
CPSF4-206ENST00000441580 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 PIK3CD-AS1Q5SR53 167 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 LINC01545Q5VT33 79 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 LINC00173Q6ZV60 143 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 MRPL52Q86TS9 123 aaKnown RBP9.71□□□□□ -0.86
CPSF4-206ENST00000441580 STHQ8IWL8 128 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.86
CPSF4-206ENST00000441580 GAS8-AS1O95177 125 aa9.7□□□□□ -0.86
CPSF4-206ENST00000441580 IGLV1-51P01701 117 aa9.7□□□□□ -0.86
CPSF4-206ENST00000441580 PF4P02776 101 aa9.7□□□□□ -0.86
CPSF4-206ENST00000441580 GATA1P15976 413 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-206ENST00000441580 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
CPSF4-206ENST00000441580 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
CPSF4-206ENST00000441580 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-206ENST00000441580 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
CPSF4-206ENST00000441580 HSBP1L1C9JCN9 74 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 CRLF1O75462 422 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 FXYD7P58549 80 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 NUTF2P61970 127 aaKnown RBP9.69□□□□□ -0.86
CPSF4-206ENST00000441580 LAGE3Q14657 143 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 LGALS9BQ3B8N2 356 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 TRPT1Q86TN4 253 aaKnown RBP9.69□□□□□ -0.86
CPSF4-206ENST00000441580 RASL10AQ92737 203 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 PTH2Q96A98 100 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 MIEN1Q9BRT3 115 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 MXRA5Q9NR99 2828 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 AKAP9Q99996 3911 aa9.69□□□□□ -0.86
CPSF4-206ENST00000441580 MAP1AP78559 2803 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-206ENST00000441580 ZNF469Q96JG9 3925 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-206ENST00000441580 ATP5LO75964 103 aa9.68□□□□□ -0.86
CPSF4-206ENST00000441580 RBMY1A1P0DJD3 496 aaKnown RBP9.68□□□□□ -0.86
CPSF4-206ENST00000441580 RBMY1CP0DJD4 496 aa9.68□□□□□ -0.86
CPSF4-206ENST00000441580 RBMY1FQ15415 496 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms