RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 FAM181BA6NEQ2 426 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 COX8AP10176 69 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 DYNLT3P51808 116 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 CLEC7AQ9BXN2 247 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 DEFB126Q9BYW3 111 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 IGLV3-12A0A075B6K2 115 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 C6orf201Q7Z4U5 140 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 FAM103A1Q9BTL3 118 aaKnown RBP7.84□□□□□ -1.15
SYNE2-206ENST00000441438 GNG13Q9P2W3 67 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 PIGBOS1A0A0B4J2F0 54 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 UBE2L5PA0A1B0GUS4 154 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 HBDP02042 147 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 CCL4P13236 92 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 UBE2L3P68036 154 aaKnown RBP7.84□□□□□ -1.15
SYNE2-206ENST00000441438 SERF2P84101 59 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 TMEM243Q9BU79 118 aa7.84□□□□□ -1.15
SYNE2-206ENST00000441438 CEMP1Q6PRD7 247 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-206ENST00000441438 GFRALQ6UXV0 394 aa7.83□□□□□ -1.16
SYNE2-206ENST00000441438 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
SYNE2-206ENST00000441438 UBE2BP63146 152 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 BAGE3Q86Y29 109 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 BAGE2Q86Y30 109 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 NXT2Q9NPJ8 142 aaKnown RBP7.82□□□□□ -1.16
SYNE2-206ENST00000441438 PIEZO2Q9H5I5 2752 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 IGHV5-10-1A0A0J9YXX1 117 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 CCL8P80075 99 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 KIAA0087Q14695 138 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 TPRP12270 2363 aaKnown RBP7.82□□□□□ -1.16
SYNE2-206ENST00000441438 CCL3P10147 92 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 MDP1Q86V88 176 aa7.82□□□□□ -1.16
SYNE2-206ENST00000441438 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 TMEM155Q4W5P6 130 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 OPRPNQ99935 248 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-206ENST00000441438 ZNF286AQ9HBT8 521 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 PCNX1Q96RV3 2341 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 CADP27708 2225 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 EFNA4P52798 201 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 SMIM7Q9BQ49 75 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 NBASA2RRP1 2371 aa7.81□□□□□ -1.16
SYNE2-206ENST00000441438 GTF3C1Q12789 2109 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 DSCR4P56555 118 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-206ENST00000441438 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 TSKUQ8WUA8 353 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 EPG5Q9HCE0 2579 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 HERVK_113P61574 105 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 CD177Q8N6Q3 437 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 MGST2Q99735 147 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 PPYP01298 95 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SYNE2-206ENST00000441438 ZNF645Q8N7E2 425 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 TIMM9Q9Y5J7 89 aa7.8□□□□□ -1.16
SYNE2-206ENST00000441438 IGHV3OR16-13A0A075B7E8 117 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 SLC25A16P16260 332 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 FXYD4P59646 89 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 C7orf65Q6ZTY9 151 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 ADGRG4Q8IZF6 3080 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 LINC00473A8K010 186 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 CEBPZOSA8MTT3 80 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 SERP2Q8N6R1 65 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 ZNF702PQ9H963 129 aa7.79□□□□□ -1.16
SYNE2-206ENST00000441438 Q8N8P6 123 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 ZNF492Q9P255 531 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 ARHGAP21Q5T5U3 1957 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 FRMD6-AS1P0C7T7 363 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 DIRC1Q969H9 104 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 FAM208BQ5VWN6 2430 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 DOCK11Q5JSL3 2073 aa7.78□□□□□ -1.16
SYNE2-206ENST00000441438 ZNF525Q8N782 197 aa7.77□□□□□ -1.16
SYNE2-206ENST00000441438 LINC00474Q9P2X8 69 aa7.77□□□□□ -1.16
SYNE2-206ENST00000441438 SLC25A15Q9Y619 301 aa7.77□□□□□ -1.16
SYNE2-206ENST00000441438 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.16
SYNE2-206ENST00000441438 CHD8Q9HCK8 2581 aa7.77□□□□□ -1.17
SYNE2-206ENST00000441438 IGHV3-64DA0A0J9YX35 117 aa7.77□□□□□ -1.17
SYNE2-206ENST00000441438 RNASE4P34096 147 aaKnown RBP7.77□□□□□ -1.17
SYNE2-206ENST00000441438 A0A1W2PS18 150 aa7.76□□□□□ -1.17
SYNE2-206ENST00000441438 IGKV1-16P04430 117 aa7.76□□□□□ -1.17
SYNE2-206ENST00000441438 GGNQ86UU5 652 aa7.76□□□□□ -1.17
SYNE2-206ENST00000441438 ITLN1Q8WWA0 313 aa7.76□□□□□ -1.17
SYNE2-206ENST00000441438 ITLN2Q8WWU7 325 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-206ENST00000441438 A0A1W2PNU3 283 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-206ENST00000441438 SYNJ2BPP57105 145 aa7.76□□□□□ -1.17
SYNE2-206ENST00000441438 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 HOXA4Q00056 320 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-206ENST00000441438 C5orf38Q86SI9 138 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 NPCDR1Q9BY65 106 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 TANC2Q9HCD6 1990 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 CEP295Q9C0D2 2601 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 M0R135 149 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 RBM3P98179 157 aaKnown RBP7.75□□□□□ -1.17
SYNE2-206ENST00000441438 C10orf128Q5T292 105 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 C11orf71Q6IPW1 123 aa7.75□□□□□ -1.17
SYNE2-206ENST00000441438 IGLV3-32A0A0A0MS00 114 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 CTXND1A0A1B0GTU2 59 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 CCKP06307 115 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 PIGYQ3MUY2 71 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 ZNF818PQ6ZRF7 136 aa7.74□□□□□ -1.17
SYNE2-206ENST00000441438 PKD1L2Q7Z442 2459 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms