RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LINC00527Q9UJ94 153 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 U3KQK5 164 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 GVINP1Q7Z2Y8 2422 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 DIDO1Q9BTC0 2240 aaKnown RBP2.54□□□□□ -2
HMGB3P11-201ENST00000440127 MUC6Q6W4X9 2439 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 APC2O95996 2303 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 MALRD1Q5VYJ5 2156 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 TRAV9-2A0A087WT02 112 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3-49A0A0A0MS15 119 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV1-24A0A0C4DH33 117 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 A0A1B0GV90 55 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 C20orf202A1L168 122 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 TMEM213A2RRL7 107 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 C2orf70A6NJV1 201 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 SYS1-DBNDD2H3BUS1 97 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 J3QLI3 93 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 OVOL1O14753 267 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 LEPROTL1O95214 131 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 AZU1P20160 251 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 CTRLP40313 264 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 BLCAPP62952 87 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 HIST1H1AQ02539 215 aaPredicted RBP2.53□□□□□ -2
HMGB3P11-201ENST00000440127 MRPL51Q4U2R6 128 aaKnown RBP2.53□□□□□ -2
HMGB3P11-201ENST00000440127 FA2HQ7L5A8 372 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 ORMDL3Q8N138 153 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 RNF182Q8N6D2 247 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 FER1L6-AS1Q8NA97 138 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 OR4X2Q8NGF9 303 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 Q8TAT8 98 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 LINC00477Q96M19 166 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 PRELID3AQ96N28 172 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 MAP1LC3CQ9BXW4 147 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 TMEM191AQ9H0A3 160 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 ESM1Q9NQ30 184 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 SIGLEC8Q9NYZ4 499 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 UQCR10Q9UDW1 63 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 ZMAT5Q9UDW3 170 aaKnown RBP2.53□□□□□ -2
HMGB3P11-201ENST00000440127 HSPB8Q9UJY1 196 aa2.53□□□□□ -2
HMGB3P11-201ENST00000440127 MYO15AQ9UKN7 3530 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 CEP250Q9BV73 2442 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 SPEGQ15772 3267 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 PLCE1Q9P212 2302 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 ICE1Q9Y2F5 2266 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 MUC21A0A0G2JKD1 596 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGHV7-4-1A0A0J9YVY3 117 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 MUC21A0A140T8X8 626 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 LOC389332A0A1B0GUA5 103 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 D6R8Y8 96 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 K7EMT4 169 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 CRXO43186 299 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 TRBV12-3P01733 135 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGHV3-11P01762 117 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 PPBPP02775 128 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 PRB1P04280 392 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGLC3P0DOY3 106 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 CKS2P33552 79 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 IFI27P40305 119 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 HNRNPA3P51991 378 aaKnown RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 NUTF2P61970 127 aaKnown RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 CACNG7P62955 275 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 DEFB112Q30KQ8 113 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 MUC21Q5SSG8 566 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 UNQ9165/PRO28630Q6UXU0 137 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 LINC00173Q6ZV60 143 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 SMIM15Q7Z3B0 74 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 AMN1Q8IY45 258 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 ZNF738Q8NE65 137 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 OR10J6PQ8NGY7 276 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 OR10AG1Q8NH19 301 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 NRGNQ92686 78 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 RHPN1-AS1Q9BWJ2 59 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 SNHG12Q9BXW3 62 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 CNFNQ9BYD5 112 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 PEF1Q9UBV8 284 aaKnown RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 SMPXQ9UHP9 88 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 LAMTOR2Q9Y2Q5 125 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 LENEPQ9Y5L5 61 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 CUL9Q8IWT3 2517 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 RIF1Q5UIP0 2472 aaKnown RBP2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 COL6A3P12111 3177 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 PTPRQQ9UMZ3 2332 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 POLEQ07864 2286 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 TNCP24821 2201 aa2.52□□□□□ -2.01
HMGB3P11-201ENST00000440127 FRYLO94915 3013 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 A0A096LNT2 108 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 TRAV21A0A0B4J279 112 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 TRBV7-9A0A0J9YWB2 115 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 OR4C46A6NHA9 309 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 HSBP1L1C9JCN9 74 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 G3V4G9 280 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 SMKR1H3BMG3 65 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 SOCS3O14543 225 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 TCAPO15273 167 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 TCF21O43680 179 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGLL1P15814 213 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 SAMD13Q5VXD3 122 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 Q6ZN92 141 aa2.51□□□□□ -2.01
HMGB3P11-201ENST00000440127 SPATA12Q7Z6I5 190 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms