RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HHLA3Q9XRX5 114 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 TRGV4A0A0C4DH28 118 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 RAB19A4D1S5 217 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 PGPEP1LA6NFU8 196 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 PAX4O43316 350 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 CRYBA4P53673 196 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
HSPG2-206ENST00000439717 PRR27Q6MZM9 219 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 ZNF575Q86XF7 245 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 UBE2DNLQ8IWF7 75 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 KMT2AQ03164 3969 aa8.24□□□□□ -1.09
HSPG2-206ENST00000439717 DNAH6Q9C0G6 4158 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 TMSB15BA0A087X1C1 80 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 GRIFINA4D1Z8 144 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 H3BVH4 76 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 RS1O15537 224 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 SFTA3P0C7M3 94 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 ARMS2P0C7Q2 107 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 MGST1P10620 155 aaKnown RBP8.23□□□□□ -1.09
HSPG2-206ENST00000439717 CCL18P55774 89 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 CFAP126Q5VTH2 177 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 SYT8Q8NBV8 401 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 DAZAP1Q96EP5 407 aaKnown RBP8.23□□□□□ -1.09
HSPG2-206ENST00000439717 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 EIF5A2Q9GZV4 153 aaKnown RBP8.23□□□□□ -1.09
HSPG2-206ENST00000439717 SCRT2Q9NQ03 307 aa8.23□□□□□ -1.09
HSPG2-206ENST00000439717 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 TRBV20OR9-2A0A075B6H5 130 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 A8MWV9 139 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 TOR2AQ5JU69 321 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 PARLQ9H300 379 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
HSPG2-206ENST00000439717 MUC4Q99102 2169 aa8.21□□□□□ -1.09
HSPG2-206ENST00000439717 A0A096LPF7 62 aa8.21□□□□□ -1.1
HSPG2-206ENST00000439717 C19orf71A6NCJ1 209 aa8.21□□□□□ -1.1
HSPG2-206ENST00000439717 RPS20P60866 119 aaKnown RBP8.21□□□□□ -1.1
HSPG2-206ENST00000439717 RPL19P84098 196 aaKnown RBP8.21□□□□□ -1.1
HSPG2-206ENST00000439717 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
HSPG2-206ENST00000439717 GATA1P15976 413 aaPredicted RBP8.2□□□□□ -1.1
HSPG2-206ENST00000439717 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
HSPG2-206ENST00000439717 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
HSPG2-206ENST00000439717 ZFP82Q8N141 532 aa8.2□□□□□ -1.1
HSPG2-206ENST00000439717 PCNPQ8WW12 178 aaKnown RBP8.2□□□□□ -1.1
HSPG2-206ENST00000439717 SSBP4Q9BWG4 385 aaPredicted RBP8.2□□□□□ -1.1
HSPG2-206ENST00000439717 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
HSPG2-206ENST00000439717 TRBV6-4A0A1B0GX49 114 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 XKRY2A2RUG3 117 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 SNAI2O43623 268 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 P01737 135 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 OR5AL1P0C617 328 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 ESRGQ1W209 222 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 SMDT1Q9H4I9 107 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
HSPG2-206ENST00000439717 K7EQD1 137 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 M0R381 172 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 RHODO00212 210 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 NXPH4O95158 308 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
HSPG2-206ENST00000439717 GYPEP15421 78 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 CEBPGP53567 150 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 RHOHQ15669 191 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 UFSP1Q6NVU6 142 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 ZNRF2Q8NHG8 242 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 SFRP2Q96HF1 295 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 PRADC1Q9BSG0 188 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 UPK3BQ9BT76 320 aa8.18□□□□□ -1.1
HSPG2-206ENST00000439717 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 K7EN84 100 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 SRIP30626 198 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 PEA15Q15121 130 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 SLC25A29Q8N8R3 303 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 NUDT10Q8NFP7 164 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 NUDT11Q96G61 164 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 SMIM7Q9BQ49 75 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 JPT2Q9H910 190 aa8.17□□□□□ -1.1
HSPG2-206ENST00000439717 MRPS16Q9Y3D3 137 aaKnown RBP8.17□□□□□ -1.1
HSPG2-206ENST00000439717 ZNF727A8MUV8 499 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 IGLC6P0CF74 106 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 RAB14P61106 215 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 FER1L6-AS1Q8NA97 138 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 SAMD10Q9BYL1 202 aa8.16□□□□□ -1.1
HSPG2-206ENST00000439717 A0A1W2PPQ1 181 aa8.15□□□□□ -1.1
HSPG2-206ENST00000439717 F2Z2F3 143 aa8.15□□□□□ -1.1
HSPG2-206ENST00000439717 CRYGDP07320 174 aa8.15□□□□□ -1.1
HSPG2-206ENST00000439717 GZMBP10144 247 aa8.15□□□□□ -1.1
HSPG2-206ENST00000439717 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.1
HSPG2-206ENST00000439717 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms