RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
APP-208ENST00000439274 NEXN-AS1Q8NBZ9 246 aa11.6□□□□□ -0.55
APP-208ENST00000439274 IGSF10Q6WRI0 2623 aa11.6□□□□□ -0.55
APP-208ENST00000439274 IGHV4-61A0A0C4DH41 118 aa11.59□□□□□ -0.55
APP-208ENST00000439274 PF4V1P10720 104 aa11.59□□□□□ -0.55
APP-208ENST00000439274 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
APP-208ENST00000439274 BLCAPP62952 87 aa11.59□□□□□ -0.55
APP-208ENST00000439274 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
APP-208ENST00000439274 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
APP-208ENST00000439274 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
APP-208ENST00000439274 ATP6V0BQ99437 205 aa11.59□□□□□ -0.55
APP-208ENST00000439274 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
APP-208ENST00000439274 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
APP-208ENST00000439274 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
APP-208ENST00000439274 C20orf78Q9BR46 151 aa11.59□□□□□ -0.55
APP-208ENST00000439274 USP24Q9UPU5 2620 aa11.59□□□□□ -0.55
APP-208ENST00000439274 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
APP-208ENST00000439274 E9PLD3 99 aa11.58□□□□□ -0.56
APP-208ENST00000439274 OR11H1Q8NG94 326 aa11.58□□□□□ -0.56
APP-208ENST00000439274 OR11H2Q8NH07 326 aa11.58□□□□□ -0.56
APP-208ENST00000439274 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
APP-208ENST00000439274 MUC4Q99102 2169 aa11.58□□□□□ -0.56
APP-208ENST00000439274 TEX48A0A1B0GUV7 120 aa11.58□□□□□ -0.56
APP-208ENST00000439274 H3BUX3 64 aa11.58□□□□□ -0.56
APP-208ENST00000439274 RHPN1-AS1Q9BWJ2 59 aa11.58□□□□□ -0.56
APP-208ENST00000439274 ACACBO00763 2458 aa11.58□□□□□ -0.56
APP-208ENST00000439274 TRBV7-3A0A075B6L6 115 aa11.57□□□□□ -0.56
APP-208ENST00000439274 MYMXA0A1B0GTQ4 84 aa11.57□□□□□ -0.56
APP-208ENST00000439274 ZNF479Q96JC4 524 aa11.57□□□□□ -0.56
APP-208ENST00000439274 JPT2Q9H910 190 aa11.57□□□□□ -0.56
APP-208ENST00000439274 PRSS29PA6NIE9 313 aa11.57□□□□□ -0.56
APP-208ENST00000439274 CYSLTR1Q9Y271 337 aa11.57□□□□□ -0.56
APP-208ENST00000439274 CELSR2Q9HCU4 2923 aa11.57□□□□□ -0.56
APP-208ENST00000439274 SLC25A16P16260 332 aa11.56□□□□□ -0.56
APP-208ENST00000439274 TAL2Q16559 108 aa11.56□□□□□ -0.56
APP-208ENST00000439274 AMTNQ6UX39 209 aa11.56□□□□□ -0.56
APP-208ENST00000439274 SPG11Q96JI7 2443 aa11.55□□□□□ -0.56
APP-208ENST00000439274 H3BMG7 143 aa11.55□□□□□ -0.56
APP-208ENST00000439274 DUSP14O95147 198 aaKnown RBP11.55□□□□□ -0.56
APP-208ENST00000439274 IGHG2P01859 326 aa11.55□□□□□ -0.56
APP-208ENST00000439274 LGALS1P09382 135 aaKnown RBP11.55□□□□□ -0.56
APP-208ENST00000439274 WFDC2Q14508 124 aa11.55□□□□□ -0.56
APP-208ENST00000439274 FOXI2Q6ZQN5 318 aa11.55□□□□□ -0.56
APP-208ENST00000439274 MTURNQ8N3F0 131 aa11.55□□□□□ -0.56
APP-208ENST00000439274 PRADC1Q9BSG0 188 aa11.55□□□□□ -0.56
APP-208ENST00000439274 EMP1P54849 157 aa11.55□□□□□ -0.56
APP-208ENST00000439274 USMG5Q96IX5 58 aa11.55□□□□□ -0.56
APP-208ENST00000439274 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
APP-208ENST00000439274 CRYBG3Q68DQ2 2970 aa11.54□□□□□ -0.56
APP-208ENST00000439274 LINC00315P59091 139 aa11.54□□□□□ -0.56
APP-208ENST00000439274 BBC3Q96PG8 261 aaPredicted RBP11.54□□□□□ -0.56
APP-208ENST00000439274 A0A087WWL8 130 aa11.53□□□□□ -0.56
APP-208ENST00000439274 A6NDX4 124 aa11.53□□□□□ -0.56
APP-208ENST00000439274 MED14OSP0DP75 135 aa11.53□□□□□ -0.56
APP-208ENST00000439274 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
APP-208ENST00000439274 PLEKHB2Q96CS7 222 aa11.53□□□□□ -0.56
APP-208ENST00000439274 KIF25-AS1Q9Y6Z4 181 aa11.53□□□□□ -0.56
APP-208ENST00000439274 PRB1P04280 392 aa11.53□□□□□ -0.56
APP-208ENST00000439274 CRYGDP07320 174 aa11.53□□□□□ -0.56
APP-208ENST00000439274 TSHBP01222 138 aa11.52□□□□□ -0.56
APP-208ENST00000439274 RRN3P1Q2M238 152 aa11.52□□□□□ -0.56
APP-208ENST00000439274 KLHL30-AS1Q8NEE0 82 aa11.52□□□□□ -0.56
APP-208ENST00000439274 PIMREGQ9BSJ6 248 aa11.52□□□□□ -0.56
APP-208ENST00000439274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.52□□□□□ -0.57
APP-208ENST00000439274 ZNF815PA8K554 130 aa11.52□□□□□ -0.57
APP-208ENST00000439274 CD300EQ496F6 205 aaPredicted RBP11.52□□□□□ -0.57
APP-208ENST00000439274 DAZ1Q9NQZ3 744 aaKnown RBP11.52□□□□□ -0.57
APP-208ENST00000439274 TP53TG1Q9Y2A0 90 aa11.52□□□□□ -0.57
APP-208ENST00000439274 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
APP-208ENST00000439274 RPL39P62891 51 aaKnown RBP11.51□□□□□ -0.57
APP-208ENST00000439274 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
APP-208ENST00000439274 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
APP-208ENST00000439274 FAM159AQ6UWV7 190 aa11.51□□□□□ -0.57
APP-208ENST00000439274 SH2D6Q7Z4S9 175 aa11.51□□□□□ -0.57
APP-208ENST00000439274 C11orf86A6NJI1 115 aa11.5□□□□□ -0.57
APP-208ENST00000439274 KLLNB2CW77 178 aa11.5□□□□□ -0.57
APP-208ENST00000439274 H3BUA1 57 aa11.5□□□□□ -0.57
APP-208ENST00000439274 NXPH4O95158 308 aa11.5□□□□□ -0.57
APP-208ENST00000439274 SPANXB1Q9NS25 103 aaPredicted RBP11.5□□□□□ -0.57
APP-208ENST00000439274 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
APP-208ENST00000439274 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
APP-208ENST00000439274 CD7P09564 240 aa11.5□□□□□ -0.57
APP-208ENST00000439274 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
APP-208ENST00000439274 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
APP-208ENST00000439274 POM121L12Q8N7R1 296 aa11.5□□□□□ -0.57
APP-208ENST00000439274 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
APP-208ENST00000439274 A0A1B0GWB2 263 aa11.49□□□□□ -0.57
APP-208ENST00000439274 F5H697 171 aa11.49□□□□□ -0.57
APP-208ENST00000439274 LINC01619G3V211 115 aa11.49□□□□□ -0.57
APP-208ENST00000439274 IGKV3-20P01619 116 aa11.49□□□□□ -0.57
APP-208ENST00000439274 ZFP2Q6ZN57 461 aa11.49□□□□□ -0.57
APP-208ENST00000439274 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
APP-208ENST00000439274 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
APP-208ENST00000439274 F8W1H4 67 aa11.49□□□□□ -0.57
APP-208ENST00000439274 COX6B1P14854 86 aa11.49□□□□□ -0.57
APP-208ENST00000439274 ETDBQ3ZM63 59 aa11.49□□□□□ -0.57
APP-208ENST00000439274 DCANP1Q8TF63 244 aa11.49□□□□□ -0.57
APP-208ENST00000439274 CCL19Q99731 98 aa11.49□□□□□ -0.57
APP-208ENST00000439274 CSMD2Q7Z408 3487 aa11.48□□□□□ -0.57
APP-208ENST00000439274 BRI3O95415 125 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms