RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 IGLV1-51P01701 117 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 CD7P09564 240 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
SGCE-205ENST00000437425 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 KRTAP21-3Q3LHN1 58 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 FA2HQ7L5A8 372 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 AP1S3Q96PC3 154 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
SGCE-205ENST00000437425 GNRH2O43555 120 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 PPP1R17O96001 155 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 PF4P02776 101 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 DPH3P1Q9H4G8 78 aa11.37□□□□□ -0.59
SGCE-205ENST00000437425 NUTF2P61970 127 aaKnown RBP11.36□□□□□ -0.59
SGCE-205ENST00000437425 Q6ZWC4 215 aa11.36□□□□□ -0.59
SGCE-205ENST00000437425 STHQ8IWL8 128 aa11.36□□□□□ -0.59
SGCE-205ENST00000437425 DEFB125Q8N687 156 aa11.36□□□□□ -0.59
SGCE-205ENST00000437425 M0R381 172 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 EVI2AP22794 236 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 INSL3P51460 131 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 C9orf85Q96MD7 179 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 NXT2Q9NPJ8 142 aaKnown RBP11.35□□□□□ -0.59
SGCE-205ENST00000437425 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
SGCE-205ENST00000437425 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 HIST2H2BDQ6DRA6 164 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 GSN-AS1Q9NRJ2 163 aa11.35□□□□□ -0.59
SGCE-205ENST00000437425 INSP01308 110 aa11.34□□□□□ -0.59
SGCE-205ENST00000437425 SMIM17P0DL12 118 aa11.34□□□□□ -0.59
SGCE-205ENST00000437425 KRTAP10-3P60369 221 aa11.34□□□□□ -0.59
SGCE-205ENST00000437425 FAM19A2Q8N3H0 131 aa11.34□□□□□ -0.59
SGCE-205ENST00000437425 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
SGCE-205ENST00000437425 HSPB8Q9UJY1 196 aa11.34□□□□□ -0.59
SGCE-205ENST00000437425 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.6
SGCE-205ENST00000437425 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
SGCE-205ENST00000437425 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
SGCE-205ENST00000437425 BEAN1Q3B7T3 259 aa11.33□□□□□ -0.6
SGCE-205ENST00000437425 PRR31Q5SQ13 230 aa11.33□□□□□ -0.6
SGCE-205ENST00000437425 PIK3CD-AS1Q5SR53 167 aa11.33□□□□□ -0.6
SGCE-205ENST00000437425 Q8N1Y9 231 aa11.33□□□□□ -0.6
SGCE-205ENST00000437425 NSD1Q96L73 2696 aaPredicted RBP11.32□□□□□ -0.6
SGCE-205ENST00000437425 DNHD1Q96M86 4753 aa11.32□□□□□ -0.6
SGCE-205ENST00000437425 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
SGCE-205ENST00000437425 CBY3A6NI87 242 aa11.32□□□□□ -0.6
SGCE-205ENST00000437425 LEPROTL1O95214 131 aa11.32□□□□□ -0.6
SGCE-205ENST00000437425 NPYP01303 97 aa11.32□□□□□ -0.6
SGCE-205ENST00000437425 POM121L12Q8N7R1 296 aa11.32□□□□□ -0.6
SGCE-205ENST00000437425 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
SGCE-205ENST00000437425 IFI27P40305 119 aaPredicted RBP11.31□□□□□ -0.6
SGCE-205ENST00000437425 KRTDAPP60985 99 aa11.31□□□□□ -0.6
SGCE-205ENST00000437425 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
SGCE-205ENST00000437425 PTH2Q96A98 100 aa11.31□□□□□ -0.6
SGCE-205ENST00000437425 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
SGCE-205ENST00000437425 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
SGCE-205ENST00000437425 K7EMI3 77 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
SGCE-205ENST00000437425 CITED1Q99966 193 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
SGCE-205ENST00000437425 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 NCR2O95944 276 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 C9orf66Q5T8R8 295 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 Q8N8P6 123 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 NDUFAF3Q9BU61 184 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 CUBNO60494 3623 aa11.3□□□□□ -0.6
SGCE-205ENST00000437425 TSTD3H0UI37 97 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 ZNF124Q15973 351 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
SGCE-205ENST00000437425 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
SGCE-205ENST00000437425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.29□□□□□ -0.6
SGCE-205ENST00000437425 NRACQ8N912 160 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
SGCE-205ENST00000437425 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 MAP1LC3CQ9BXW4 147 aa11.29□□□□□ -0.6
SGCE-205ENST00000437425 C20orf202A1L168 122 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 HBDP02042 147 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 FXYD7P58549 80 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 PKIAP61925 76 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 SPXQ9BT56 116 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 KIF25-AS1Q9Y6Z4 181 aa11.28□□□□□ -0.6
SGCE-205ENST00000437425 FN1P02751 2386 aaKnown RBP11.27□□□□□ -0.61
SGCE-205ENST00000437425 PCP4L1A6NKN8 68 aa11.27□□□□□ -0.61
SGCE-205ENST00000437425 TEX43Q6ZNM6 134 aa11.27□□□□□ -0.61
SGCE-205ENST00000437425 LINC01587Q99440 93 aa11.27□□□□□ -0.61
SGCE-205ENST00000437425 MGPP08493 103 aa11.26□□□□□ -0.61
SGCE-205ENST00000437425 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
SGCE-205ENST00000437425 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms