RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 BAGE2Q86Y30 109 aa7.99□□□□□ -1.13
COL28A1-203ENST00000435823 OR4C5Q8NGB2 326 aa7.99□□□□□ -1.13
COL28A1-203ENST00000435823 MUC4Q99102 2169 aa7.99□□□□□ -1.13
COL28A1-203ENST00000435823 M0R036 132 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 PDE6DO43924 150 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 SFTA3P0C7M3 94 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 BCL2P10415 239 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 MEF2BQ02080 365 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-203ENST00000435823 FHL2Q14192 279 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 ZNF674Q2M3X9 581 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 ZNF876PQ49A33 203 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 NHLRC2Q8NBF2 726 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 C11orf52Q96A22 123 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 ZNF479Q96JC4 524 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 HHLA3Q9XRX5 114 aa7.98□□□□□ -1.13
COL28A1-203ENST00000435823 KRBOX1C9JBD0 128 aa7.97□□□□□ -1.13
COL28A1-203ENST00000435823 RNASE3P12724 160 aaKnown RBP7.97□□□□□ -1.13
COL28A1-203ENST00000435823 RPL35P42766 123 aaKnown RBP7.97□□□□□ -1.13
COL28A1-203ENST00000435823 CRYBA4P53673 196 aa7.97□□□□□ -1.13
COL28A1-203ENST00000435823 PTH2Q96A98 100 aa7.97□□□□□ -1.13
COL28A1-203ENST00000435823 ICOSQ9Y6W8 199 aa7.97□□□□□ -1.13
COL28A1-203ENST00000435823 IGLV2-18A0A075B6J9 118 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 A0A096LPF7 62 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 PGPEP1LA6NFU8 196 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 CIDEAO60543 219 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 DNLZQ5SXM8 178 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 PCNPQ8WW12 178 aaKnown RBP7.96□□□□□ -1.14
COL28A1-203ENST00000435823 MLST8Q9BVC4 326 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 MED9Q9NWA0 146 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 IL36BQ9NZH7 164 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 LINC00588Q9Y4M8 146 aa7.96□□□□□ -1.14
COL28A1-203ENST00000435823 TMSB15BA0A087X1C1 80 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 GRIFINA4D1Z8 144 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 H3BVH4 76 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 M0R2N4 97 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 RS1O15537 224 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 MRPL23Q16540 153 aaKnown RBP7.95□□□□□ -1.14
COL28A1-203ENST00000435823 ZNF506Q5JVG8 444 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 PIK3CD-AS1Q5SR53 167 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 PRR27Q6MZM9 219 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 SYT8Q8NBV8 401 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 DERL1Q9BUN8 251 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
COL28A1-203ENST00000435823 A8MWV9 139 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 ARMS2P0C7Q2 107 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 SRIP30626 198 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 GNG4P50150 75 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 ESRGQ1W209 222 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 CENPWQ5EE01 88 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 CFAP126Q5VTH2 177 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 ZNRF2Q8NHG8 242 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 SMIM12Q96EX1 92 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 NACAE9PAV3 2078 aa7.94□□□□□ -1.14
COL28A1-203ENST00000435823 RBFOX3A6NFN3 312 aa7.93□□□□□ -1.14
COL28A1-203ENST00000435823 CXCL1P09341 107 aa7.93□□□□□ -1.14
COL28A1-203ENST00000435823 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
COL28A1-203ENST00000435823 GYPEP15421 78 aa7.93□□□□□ -1.14
COL28A1-203ENST00000435823 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
COL28A1-203ENST00000435823 LYPD6BQ8NI32 183 aa7.93□□□□□ -1.14
COL28A1-203ENST00000435823 DAZAP1Q96EP5 407 aaKnown RBP7.93□□□□□ -1.14
COL28A1-203ENST00000435823 MRPS16Q9Y3D3 137 aaKnown RBP7.93□□□□□ -1.14
COL28A1-203ENST00000435823 IGHV3-73A0A0B4J1V6 119 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 RAB19A4D1S5 217 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 K7EQD1 137 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 MED14OSP0DP75 135 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 NEGR1Q7Z3B1 354 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 ZFP82Q8N141 532 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 PRADC1Q9BSG0 188 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 UPK3BQ9BT76 320 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 BIN3Q9NQY0 253 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
COL28A1-203ENST00000435823 NBDYA0A0U1RRE5 68 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 TRBV6-4A0A1B0GX49 114 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 M0R381 172 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 RPL19P84098 196 aaKnown RBP7.91□□□□□ -1.14
COL28A1-203ENST00000435823 RHOHQ15669 191 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 SOHLH1Q5JUK2 328 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 SH2D6Q7Z4S9 175 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 PARLQ9H300 379 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 Q9H8V8 135 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 SCRT2Q9NQ03 307 aa7.91□□□□□ -1.14
COL28A1-203ENST00000435823 TMEM250H0YL14 139 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 RHODO00212 210 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 IGLV2-8P01709 118 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 RPS20P60866 119 aaKnown RBP7.9□□□□□ -1.14
COL28A1-203ENST00000435823 TTC32Q5I0X7 151 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 TOR2AQ5JU69 321 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 LYPD5Q6UWN5 251 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 Q6ZR54 194 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 LINC00336Q6ZUF6 198 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 SLC25A29Q8N8R3 303 aa7.9□□□□□ -1.14
COL28A1-203ENST00000435823 EIF5A2Q9GZV4 153 aaKnown RBP7.9□□□□□ -1.14
COL28A1-203ENST00000435823 TRBV20OR9-2A0A075B6H5 130 aa7.89□□□□□ -1.15
COL28A1-203ENST00000435823 LOC100131303A0A0U1RQF7 123 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms