RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145		A0A096LNT2	108 aa		12.05	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	PPP1R17	O96001	155 aa		12.05	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	CHAC1	Q9BUX1	264 aa		12.05	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	CELSR1	Q9NYQ6	3014 aa		12.05	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145		F8VRH5	84 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	IGHV4-59	P01825	116 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	RPL32	P62910	135 aa	Known RBP	12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	DEFB112	Q30KQ8	113 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145		H7C1H1	209 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	SRD5A1	P18405	259 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	NEXN-AS1	Q8NBZ9	246 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	ODF3	Q96PU9	254 aa		12.04	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	ZFYVE26	Q68DK2	2539 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	IGHV4OR15-8	A0A075B7B6	117 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145		A0A087WW49	117 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	LINC01356	Q8N9X3	169 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	CST9L	Q9H4G1	147 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	MGP	P08493	103 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	SCGB3A1	Q96QR1	104 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	TM2D2	Q9BX73	214 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	SELENOK	Q9Y6D0	94 aa		12.03	□□□□□ -0.48
HLA-DQB2-231	ENST00000435145	GAGE10	A6NGK3	116 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145		H3BUT2	72 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145		J3QLI3	93 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	CDKN1B	P46527	198 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	FXYD2	P54710	66 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	MAPKAPK5-AS1	Q8N8E1	139 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	NRGN	Q92686	78 aa		12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	GAGE12B	A1L429	117 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145		K7EP34	96 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	C10orf99	Q6UWK7	81 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	GTF2H5	Q6ZYL4	71 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	COL12A1	Q99715	3063 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	FAM159A	Q6UWV7	190 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	C2orf66	Q6UXQ4	117 aa		12.01	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	MUC4	Q99102	2169 aa		12	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	ZFHX3	Q15911	3703 aa		12	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	GCSH	P23434	173 aa		12	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	CSTL1	Q9H114	145 aa		12	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	CHTOP	Q9Y3Y2	248 aa	Known RBP	12	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	IGSF10	Q6WRI0	2623 aa		12	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145		A0A1W2PPM0	123 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	SMIM13	P0DJ93	91 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	TAL2	Q16559	108 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	OCIAD2	Q56VL3	154 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	BAALC	Q8WXS3	180 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	SPG11	Q96JI7	2443 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	USP9X	Q93008	2570 aa	Predicted RBP	11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145		A0A0J9YX75	114 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145		K7EQG2	157 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	CEND1	Q8N111	149 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	C9orf85	Q96MD7	179 aa		11.99	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	VPS13C	Q709C8	3753 aa		11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	LINC01619	G3V211	115 aa		11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	FSHB	P01225	129 aa		11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	POLR2K	P53803	58 aa	Known RBP	11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	RAB37	Q96AX2	223 aa		11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	NAA38	Q9BRA0	125 aa	Known RBP	11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	TRAV12-3	A0A0B4J271	114 aa		11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	LGALS9	O00182	355 aa		11.98	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	FLNC	Q14315	2725 aa		11.97	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	IGHV3-16	A0A0C4DH30	117 aa		11.97	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	ZNF688	P0C7X2	276 aa		11.97	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	SUMO4	Q6EEV6	95 aa		11.97	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	LINC01549	A6NIU2	74 aa		11.96	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	LGALS1	P09382	135 aa	Known RBP	11.96	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	CD7	P09564	240 aa		11.96	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	JPT2	Q9H910	190 aa		11.96	□□□□□ -0.49
HLA-DQB2-231	ENST00000435145	PRSS29P	A6NIE9	313 aa		11.96	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	SNRPD3	P62318	126 aa	Known RBP	11.96	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	RNF152	Q8N8N0	203 aa		11.96	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	OR5A1	Q8NGJ0	315 aa		11.96	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	VPREB3	Q9UKI3	123 aa		11.96	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	TRBV6-5	A0A0K0K1A5	114 aa		11.95	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	ELANE	P08246	267 aa		11.95	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	SAMD5	Q5TGI4	173 aa		11.95	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	WFDC12	Q8WWY7	111 aa		11.95	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	CYSLTR1	Q9Y271	337 aa		11.95	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	CELSR2	Q9HCU4	2923 aa		11.95	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	IGIP	A6NJ69	53 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	OR11H12	B2RN74	326 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145		E9PLD3	99 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	NEGR1	Q7Z3B1	354 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	OR11H1	Q8NG94	326 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	OR11H2	Q8NH07	326 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	SPCS1	Q9Y6A9	102 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	TRBV7-3	A0A075B6L6	115 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	MYMX	A0A1B0GTQ4	84 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	DUSP14	O95147	198 aa	Known RBP	11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	TGFA	P01135	160 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	TSHB	P01222	138 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	CRYGD	P07320	174 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	ZFP2	Q6ZN57	461 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	ZNF702P	Q9H963	129 aa		11.94	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	CSPG4	Q6UVK1	2322 aa		11.93	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	TRBV27	A0A0K0K1C4	114 aa		11.93	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145		K7ERJ3	54 aa		11.93	□□□□□ -0.5
HLA-DQB2-231	ENST00000435145	VCY	O14598	125 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms