RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 AGRNO00468 2067 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 ITPR3Q14573 2671 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 GAS8-AS1O95177 125 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 LINC01559Q495D7 138 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 Q6YL49 198 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 NXT2Q9NPJ8 142 aaKnown RBP9.22□□□□□ -0.93
CLDN4-203ENST00000435050 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 C20orf144Q9BQM9 153 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
CLDN4-203ENST00000435050 PSMB8P28062 276 aa9.21□□□□□ -0.93
CLDN4-203ENST00000435050 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.93
CLDN4-203ENST00000435050 LINC01619G3V211 115 aa9.21□□□□□ -0.93
CLDN4-203ENST00000435050 ZNF418Q8TF45 676 aaPredicted RBP9.21□□□□□ -0.93
CLDN4-203ENST00000435050 IGLV1-40P01703 118 aa9.21□□□□□ -0.94
CLDN4-203ENST00000435050 IGLC3P0DOY3 106 aa9.21□□□□□ -0.94
CLDN4-203ENST00000435050 CTRLP40313 264 aa9.21□□□□□ -0.94
CLDN4-203ENST00000435050 SYT8Q8NBV8 401 aa9.21□□□□□ -0.94
CLDN4-203ENST00000435050 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.94
CLDN4-203ENST00000435050 LINC01587Q99440 93 aa9.21□□□□□ -0.94
CLDN4-203ENST00000435050 RAX2Q96IS3 184 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 KIR2DL5BA0A0G2JN68 375 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 KIR2DL5BA0A0G2JPC4 375 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 GPHB5Q86YW7 130 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 KIR2DL5AQ8N109 375 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 TEX29Q8N6K0 151 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 URB1-AS1Q96HZ7 61 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 SCGB3A1Q96QR1 104 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 C2orf70A6NJV1 201 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 UBE2E2Q96LR5 201 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 CELSR1Q9NYQ6 3014 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 ZNF747Q9BV97 191 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 U3KQE9 123 aa9.2□□□□□ -0.94
CLDN4-203ENST00000435050 FLNBO75369 2602 aaKnown RBP9.2□□□□□ -0.94
CLDN4-203ENST00000435050 TEX15Q9BXT5 2789 aa9.19□□□□□ -0.94
CLDN4-203ENST00000435050 TRAV8-6A0A0B4J262 113 aa9.19□□□□□ -0.94
CLDN4-203ENST00000435050 DUSP14O95147 198 aaKnown RBP9.19□□□□□ -0.94
CLDN4-203ENST00000435050 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
CLDN4-203ENST00000435050 JPT2Q9H910 190 aa9.19□□□□□ -0.94
CLDN4-203ENST00000435050 ZNF702PQ9H963 129 aa9.19□□□□□ -0.94
CLDN4-203ENST00000435050 RPL39LQ96EH5 51 aaKnown RBP9.19□□□□□ -0.94
CLDN4-203ENST00000435050 SAMD13Q5VXD3 122 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 SAP30O75446 220 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 LAGE3Q14657 143 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 CDKN1BP46527 198 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
CLDN4-203ENST00000435050 XCL2Q9UBD3 114 aa9.18□□□□□ -0.94
CLDN4-203ENST00000435050 ZNF876PQ49A33 203 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 K7EMT4 169 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 DNAJC9-AS1A6NH13 148 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 EMP1P54849 157 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 GTSCR1Q86UQ5 136 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 TMEM61Q8N0U2 210 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
CLDN4-203ENST00000435050 ZNF493Q6ZR52 646 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 STHQ8IWL8 128 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 DLX4Q92988 240 aaPredicted RBP9.16□□□□□ -0.94
CLDN4-203ENST00000435050 ST20Q9HBF5 79 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.16□□□□□ -0.94
CLDN4-203ENST00000435050 CRIP2P52943 208 aaPredicted RBP9.16□□□□□ -0.94
CLDN4-203ENST00000435050 MPV17L2Q567V2 206 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 PF4P02776 101 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 ATP5LO75964 103 aa9.16□□□□□ -0.94
CLDN4-203ENST00000435050 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
CLDN4-203ENST00000435050 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
CLDN4-203ENST00000435050 RAB37Q96AX2 223 aa9.15□□□□□ -0.94
CLDN4-203ENST00000435050 Q6ZVH6 145 aa9.15□□□□□ -0.94
CLDN4-203ENST00000435050 LRRC75A-AS1Q8N1F1 130 aa9.15□□□□□ -0.94
CLDN4-203ENST00000435050 OR9G4Q8NGQ1 327 aa9.15□□□□□ -0.94
CLDN4-203ENST00000435050 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.95
CLDN4-203ENST00000435050 TMEM97Q5BJF2 176 aa9.15□□□□□ -0.95
CLDN4-203ENST00000435050 SMR3AQ99954 134 aa9.15□□□□□ -0.95
CLDN4-203ENST00000435050 MDFICQ9P1T7 246 aa9.15□□□□□ -0.95
CLDN4-203ENST00000435050 PRM2P04554 102 aa9.14□□□□□ -0.95
CLDN4-203ENST00000435050 Q6ZSV7 163 aa9.14□□□□□ -0.95
CLDN4-203ENST00000435050 RPL35AP18077 110 aaKnown RBP9.14□□□□□ -0.95
CLDN4-203ENST00000435050 GCSHP23434 173 aa9.14□□□□□ -0.95
CLDN4-203ENST00000435050 C19orf54Q5BKX5 351 aa9.14□□□□□ -0.95
CLDN4-203ENST00000435050 Q8N8P6 123 aa9.14□□□□□ -0.95
CLDN4-203ENST00000435050 RNF185Q96GF1 192 aa9.14□□□□□ -0.95
CLDN4-203ENST00000435050 Q8N1Y9 231 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 Q8N976 141 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 CITED2Q99967 270 aaPredicted RBP9.13□□□□□ -0.95
CLDN4-203ENST00000435050 A0A0J9YX75 114 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 CCL24O00175 119 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 PLA2G2AP14555 144 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
CLDN4-203ENST00000435050 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms