RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 FAM168AQ92567 244 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 GREB1Q4ZG55 1949 aa4.06□□□□□ -1.76
PTPN4-203ENST00000430976 DOT1LQ8TEK3 1739 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 TRBV7-1A0A0A6YYK4 115 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 PPYP01298 95 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 CXCL6P80162 114 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 EBI3Q14213 229 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 MAPKAPK5-AS1Q8N8E1 139 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 C11orf72Q8NBR9 251 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 OPRPNQ99935 248 aaPredicted RBP4.05□□□□□ -1.76
PTPN4-203ENST00000430976 C16orf95Q9H693 158 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 TDRD15B5MCY1 1934 aaKnown RBP4.05□□□□□ -1.76
PTPN4-203ENST00000430976 TRAV40A0A0B4J280 105 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
PTPN4-203ENST00000430976 NDPQ00604 133 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 FAM186AA6NE01 2351 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 WNK2Q9Y3S1 2297 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 TRPM7Q96QT4 1865 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 FAM229AH3BQW9 127 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 CRPP02741 224 aa4.05□□□□□ -1.76
PTPN4-203ENST00000430976 PTPRDP23468 1912 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 IGKV2D-26A0A0A0MRZ7 120 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 C16orf97H3BN30 126 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 Q6ZSV7 163 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 ZNF492Q9P255 531 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 NUP210Q8TEM1 1887 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-203ENST00000430976 ITGB4P16144 1822 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 PCNX2A6NKB5 2137 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 TMEM131Q92545 1883 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 HCG22E2RYF7 251 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 CFC1BP0CG36 223 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 CFC1P0CG37 223 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 CASP8AP2Q9UKL3 1982 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 COL2A1P02458 1487 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-203ENST00000430976 COL5A3P25940 1745 aaPredicted RBP4.04□□□□□ -1.76
PTPN4-203ENST00000430976 IGKV1-5P01602 117 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 BAALC-AS2P0C853 105 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 CACNA1BQ00975 2339 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 PTPN13Q12923 2485 aa4.04□□□□□ -1.76
PTPN4-203ENST00000430976 IGKV1-12A0A0C4DH73 117 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 LOC101059948A0A1B0GTJ6 334 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 IGKV1D-12P01611 117 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 Q6P435 159 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 Q8N6K4 173 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 C18orf12Q96KH6 178 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 SCGB3A1Q96QR1 104 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 CCL28Q9NRJ3 127 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 THSD7BQ9C0I4 1608 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 GVINP1Q7Z2Y8 2422 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 APC2O95996 2303 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 KLK15Q9H2R5 256 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 TIAM2Q8IVF5 1701 aa4.03□□□□□ -1.76
PTPN4-203ENST00000430976 TMEM223A0PJW6 202 aa4.03□□□□□ -1.77
PTPN4-203ENST00000430976 TMEM141Q96I45 108 aa4.03□□□□□ -1.77
PTPN4-203ENST00000430976 ARFGEF2Q9Y6D5 1785 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 IGHV3OR16-13A0A075B7E8 117 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 RNF223E7ERA6 249 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 LY96Q9Y6Y9 160 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 TNRC6CQ9HCJ0 1690 aaKnown RBP4.02□□□□□ -1.77
PTPN4-203ENST00000430976 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 MGPP08493 103 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 CD59P13987 128 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 NYNRINQ9P2P1 1898 aaKnown RBP4.02□□□□□ -1.77
PTPN4-203ENST00000430976 LINC00473A8K010 186 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 Q6ZRM9 215 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 NDUFA11Q86Y39 141 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 ZNF524Q96C55 264 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 TXNDC17Q9BRA2 123 aa4.02□□□□□ -1.77
PTPN4-203ENST00000430976 FGF23Q9GZV9 251 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-203ENST00000430976 C6orf106Q9H6K1 298 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-203ENST00000430976 IGKV1-27A0A075B6S5 117 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 IGHV6-1A0A0B4J1U7 121 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 RIGQ13278 110 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 C16orf47Q6ZP98 133 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-203ENST00000430976 WFDC9Q8NEX5 89 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 LCTP09848 1927 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 NDUFC1O43677 76 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 RNASE1P07998 156 aaKnown RBP4.01□□□□□ -1.77
PTPN4-203ENST00000430976 C1orf100Q5SVJ3 147 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 SND1-IT1Q9HBX3 110 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 LHFPL6Q9Y693 200 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 F5P12259 2224 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 ZNF236Q9UL36 1845 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 LINC01590Q5TEZ4 76 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 MIR17HGQ75NE6 70 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 LRRK2Q5S007 2527 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 PLXNA1Q9UIW2 1896 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 SCN7AQ01118 1682 aa4.01□□□□□ -1.77
PTPN4-203ENST00000430976 BGLAPP02818 100 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 GP1BBP13224 206 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 KIAA0087Q14695 138 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 URB1-AS1Q96HZ7 61 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 R4GMQ9 66 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 NRXN2Q9P2S2 1712 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 IGHV1OR15-1A0A075B7D0 117 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 TRGV8A0A0C4DH27 118 aa4□□□□□ -1.77
PTPN4-203ENST00000430976 PRR3P79522 188 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms