RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 NDUFV3P56181 108 aaKnown RBP13.08□□□□□ -0.32
RIF1-204ENST00000430328 Q6ZS49 121 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 KLF2Q9Y5W3 355 aaPredicted RBP13.08□□□□□ -0.32
RIF1-204ENST00000430328 LECT2O14960 151 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 LINC00205P59089 165 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 LYPD6Q86Y78 171 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 C20orf197Q8N268 126 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 RNF152Q8N8N0 203 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
RIF1-204ENST00000430328 ATP6V0E2Q8NHE4 81 aa13.08□□□□□ -0.32
RIF1-204ENST00000430328 A0A0J9YY99 117 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 NDUFA4L2Q9NRX3 87 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 CSRP2Q16527 193 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 NDUFC1O43677 76 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 PRDM6Q9NQX0 595 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 C5orf63A6NC05 138 aa13.07□□□□□ -0.32
RIF1-204ENST00000430328 TECTAO75443 2155 aa13.06□□□□□ -0.32
RIF1-204ENST00000430328 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
RIF1-204ENST00000430328 MARF1Q9Y4F3 1742 aaKnown RBP13.06□□□□□ -0.32
RIF1-204ENST00000430328 RETNQ9HD89 108 aa13.06□□□□□ -0.32
RIF1-204ENST00000430328 H3BRN7 92 aa13.06□□□□□ -0.32
RIF1-204ENST00000430328 IGKV2D-26A0A0A0MRZ7 120 aa13.06□□□□□ -0.32
RIF1-204ENST00000430328 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
RIF1-204ENST00000430328 UBE2E1P51965 193 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 IGLV10-54A0A075B6I4 117 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 A0A0G2JRQ6 117 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 NCR3O14931 201 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 SIPA1L3O60292 1781 aaPredicted RBP13.05□□□□□ -0.32
RIF1-204ENST00000430328 Q6ZRM9 215 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 CCL18P55774 89 aa13.05□□□□□ -0.32
RIF1-204ENST00000430328 RIF1Q5UIP0 2472 aaKnown RBP13.04□□□□□ -0.32
RIF1-204ENST00000430328 PRR30Q53SZ7 412 aaPredicted RBP13.04□□□□□ -0.32
RIF1-204ENST00000430328 GLI3P10071 1580 aa13.04□□□□□ -0.32
RIF1-204ENST00000430328 EIF4EBP2Q13542 120 aaPredicted RBP13.04□□□□□ -0.32
RIF1-204ENST00000430328 NDUFA1O15239 70 aa13.04□□□□□ -0.32
RIF1-204ENST00000430328 FGF23Q9GZV9 251 aaPredicted RBP13.04□□□□□ -0.32
RIF1-204ENST00000430328 BPESC1Q9GZL8 116 aa13.04□□□□□ -0.32
RIF1-204ENST00000430328 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
RIF1-204ENST00000430328 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
RIF1-204ENST00000430328 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
RIF1-204ENST00000430328 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
RIF1-204ENST00000430328 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
RIF1-204ENST00000430328 C10orf105Q8TEF2 133 aa13.03□□□□□ -0.32
RIF1-204ENST00000430328 CLEC2BQ92478 149 aa13.03□□□□□ -0.32
RIF1-204ENST00000430328 K7EM74 188 aa13.02□□□□□ -0.32
RIF1-204ENST00000430328 TCF20Q9UGU0 1960 aaKnown RBP13.02□□□□□ -0.33
RIF1-204ENST00000430328 MSMBP08118 114 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 FANCD2OSQ96PS1 177 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 PRR20EP86478 221 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 PRR20CP86479 221 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 PRR20DP86480 221 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 PRR20BP86481 221 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 PRR20AP86496 221 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 LYPD2Q6UXB3 125 aa13.02□□□□□ -0.33
RIF1-204ENST00000430328 LY6DQ14210 128 aa13.01□□□□□ -0.33
RIF1-204ENST00000430328 GYPEP15421 78 aa13.01□□□□□ -0.33
RIF1-204ENST00000430328 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
RIF1-204ENST00000430328 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
RIF1-204ENST00000430328 GNRH2O43555 120 aa13□□□□□ -0.33
RIF1-204ENST00000430328 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
RIF1-204ENST00000430328 FRMPD3Q5JV73 1810 aa13□□□□□ -0.33
RIF1-204ENST00000430328 IGLV3-12A0A075B6K2 115 aa13□□□□□ -0.33
RIF1-204ENST00000430328 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
RIF1-204ENST00000430328 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
RIF1-204ENST00000430328 FXYD5Q96DB9 178 aa13□□□□□ -0.33
RIF1-204ENST00000430328 DAND5Q8N907 189 aa13□□□□□ -0.33
RIF1-204ENST00000430328 HIGD1BQ9P298 99 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 ELANEP08246 267 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 GGNQ86UU5 652 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 G3V318 75 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 K7EQD1 137 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 FAM120AOSQ5T036 256 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 LENEPQ9Y5L5 61 aa12.99□□□□□ -0.33
RIF1-204ENST00000430328 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 PLXNA2O75051 1894 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 FXYD2P54710 66 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 TMEM131Q92545 1883 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 COL8A2P25067 703 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 SDIM1Q6ZPB5 146 aa12.98□□□□□ -0.33
RIF1-204ENST00000430328 IGHV1-69P01742 117 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 ZNF833PQ6ZTB9 187 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 RPL39LQ96EH5 51 aaKnown RBP12.97□□□□□ -0.33
RIF1-204ENST00000430328 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 C5orf24Q7Z6I8 188 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 Q9UFV3 132 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 COX7BP24311 80 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 QRFPP83859 136 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
RIF1-204ENST00000430328 ATP5EP2Q5VTU8 51 aa12.96□□□□□ -0.33
RIF1-204ENST00000430328 IGLC6P0CF74 106 aa12.96□□□□□ -0.34
RIF1-204ENST00000430328 NPBQ8NG41 125 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 KIR2DL5BQ8NHK3 375 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 LYPD6BQ8NI32 183 aa12.95□□□□□ -0.34
RIF1-204ENST00000430328 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms