RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 GAGE12BA1L429 117 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 K7EN84 100 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 SPINK4O60575 86 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 GAGE7O76087 117 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 GAGE12FP0CL80 117 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 GAGE12GP0CL81 117 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 GAGE12IP0CL82 117 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 OR5I1Q13606 314 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 SMDT1Q9H4I9 107 aa11.85□□□□□ -0.51
UBE3D-204ENST00000430071 PKD1P98161 4303 aa11.84□□□□□ -0.51
UBE3D-204ENST00000430071 C19orf71A6NCJ1 209 aa11.84□□□□□ -0.51
UBE3D-204ENST00000430071 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
UBE3D-204ENST00000430071 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
UBE3D-204ENST00000430071 MRPL16Q9NX20 251 aaKnown RBP11.84□□□□□ -0.51
UBE3D-204ENST00000430071 HERC2O95714 4834 aa11.84□□□□□ -0.51
UBE3D-204ENST00000430071 TRGV1A0A0A0MS02 117 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 GRIFINA4D1Z8 144 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 Q6ZR54 194 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 SPXQ9BT56 116 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 KIAA1109Q2LD37 5005 aa11.83□□□□□ -0.52
UBE3D-204ENST00000430071 A0A1B0GVY2 172 aa11.82□□□□□ -0.52
UBE3D-204ENST00000430071 ATP5G1P05496 136 aa11.82□□□□□ -0.52
UBE3D-204ENST00000430071 ASIPP42127 132 aa11.82□□□□□ -0.52
UBE3D-204ENST00000430071 NUDT3O95989 172 aa11.81□□□□□ -0.52
UBE3D-204ENST00000430071 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
UBE3D-204ENST00000430071 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
UBE3D-204ENST00000430071 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
UBE3D-204ENST00000430071 H3BVH4 76 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 M0R2P5 195 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 S100A4P26447 101 aaKnown RBP11.8□□□□□ -0.52
UBE3D-204ENST00000430071 RNF212Q495C1 297 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 LINC01551Q86U37 167 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 NUDT10Q8NFP7 164 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 DAZAP1Q96EP5 407 aaKnown RBP11.8□□□□□ -0.52
UBE3D-204ENST00000430071 NUDT11Q96G61 164 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
UBE3D-204ENST00000430071 HOXA5P20719 270 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 FAM74A3Q4VXF1 159 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 RASL10AQ92737 203 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
UBE3D-204ENST00000430071 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 TRGV2A0A075B6R0 118 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 PRSS29PA6NIE9 313 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 P01737 135 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 CXCL1P09341 107 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 TMEM241Q24JQ0 296 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 SOHLH1Q5JUK2 328 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 C18orf15Q96N68 181 aa11.79□□□□□ -0.52
UBE3D-204ENST00000430071 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
UBE3D-204ENST00000430071 GZMBP10144 247 aa11.78□□□□□ -0.52
UBE3D-204ENST00000430071 ZNF876PQ49A33 203 aa11.78□□□□□ -0.52
UBE3D-204ENST00000430071 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
UBE3D-204ENST00000430071 SCRT2Q9NQ03 307 aa11.78□□□□□ -0.52
UBE3D-204ENST00000430071 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
UBE3D-204ENST00000430071 DYNC1H1Q14204 4646 aaKnown RBP11.77□□□□□ -0.53
UBE3D-204ENST00000430071 A0A0J9YY99 117 aa11.77□□□□□ -0.53
UBE3D-204ENST00000430071 RPL23P62829 140 aaKnown RBP11.77□□□□□ -0.53
UBE3D-204ENST00000430071 PTH2Q96A98 100 aa11.77□□□□□ -0.53
UBE3D-204ENST00000430071 NAT8Q9UHE5 227 aa11.77□□□□□ -0.53
UBE3D-204ENST00000430071 TRAV26-1A0A087WT03 109 aa11.76□□□□□ -0.53
UBE3D-204ENST00000430071 LINC00862A6NCI5 91 aa11.76□□□□□ -0.53
UBE3D-204ENST00000430071 IGHV3-53P01767 116 aa11.76□□□□□ -0.53
UBE3D-204ENST00000430071 FAM231DQ6ZW35 169 aa11.76□□□□□ -0.53
UBE3D-204ENST00000430071 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
UBE3D-204ENST00000430071 ZNRF2Q8NHG8 242 aa11.76□□□□□ -0.53
UBE3D-204ENST00000430071 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
UBE3D-204ENST00000430071 MED14OSP0DP75 135 aa11.75□□□□□ -0.53
UBE3D-204ENST00000430071 SSBP4Q9BWG4 385 aaPredicted RBP11.75□□□□□ -0.53
UBE3D-204ENST00000430071 SNAI2O43623 268 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 IGLC6P0CF74 106 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 RPS20P60866 119 aaKnown RBP11.74□□□□□ -0.53
UBE3D-204ENST00000430071 ADIRFQ15847 76 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 UQCC3Q6UW78 93 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 ZNF479Q96JC4 524 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 KRTAP17-1Q9BYP8 105 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 PHLDA3Q9Y5J5 127 aa11.74□□□□□ -0.53
UBE3D-204ENST00000430071 GATCO43716 136 aaKnown RBP11.73□□□□□ -0.53
UBE3D-204ENST00000430071 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
UBE3D-204ENST00000430071 OR10AG1Q8NH19 301 aa11.73□□□□□ -0.53
UBE3D-204ENST00000430071 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
UBE3D-204ENST00000430071 TRAV4A0A0B4J268 109 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 M0R381 172 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 RS1O15537 224 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 CFAP126Q5VTH2 177 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 FER1L6-AS1Q8NA97 138 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 VSIG2Q96IQ7 327 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 JPT2Q9H910 190 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms