RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 TMEM158Q8WZ71 300 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
MBD4-203ENST00000429544 MGPP08493 103 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
MBD4-203ENST00000429544 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
MBD4-203ENST00000429544 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
MBD4-203ENST00000429544 TRAV12-2A0A075B6T6 113 aa12.1□□□□□ -0.47
MBD4-203ENST00000429544 LINC01619G3V211 115 aa12.1□□□□□ -0.47
MBD4-203ENST00000429544 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
MBD4-203ENST00000429544 SONP18583 2426 aaKnown RBP12.09□□□□□ -0.47
MBD4-203ENST00000429544 CCDC168Q8NDH2 2452 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 TCAPO15273 167 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 SLC25A34Q6PIV7 304 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 TMEM86BQ8N661 226 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 OR11H1Q8NG94 326 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 MYO9AB2RTY4 2548 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 FLNAP21333 2647 aaKnown RBP12.09□□□□□ -0.47
MBD4-203ENST00000429544 DNAJC9-AS1A6NH13 148 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 J3QKU1 62 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 CD7P09564 240 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
MBD4-203ENST00000429544 DPF1Q92782 380 aa12.09□□□□□ -0.47
MBD4-203ENST00000429544 Q6ZSV7 163 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 C4orf3Q8WVX3 66 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 SORL1Q92673 2214 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 CD5LO43866 347 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 NXPH4O95158 308 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 LAGE3Q14657 143 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 SPINK13Q1W4C9 94 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 TEX29Q8N6K0 151 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 RASL10AQ92737 203 aa12.08□□□□□ -0.48
MBD4-203ENST00000429544 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
MBD4-203ENST00000429544 COL5A1-AS1Q5SY13 56 aa12.07□□□□□ -0.48
MBD4-203ENST00000429544 STPG4Q8N801 248 aa12.07□□□□□ -0.48
MBD4-203ENST00000429544 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
MBD4-203ENST00000429544 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
MBD4-203ENST00000429544 DUSP14O95147 198 aaKnown RBP12.06□□□□□ -0.48
MBD4-203ENST00000429544 OR1N2Q8NGR9 330 aa12.06□□□□□ -0.48
MBD4-203ENST00000429544 DKK2Q9UBU2 259 aa12.06□□□□□ -0.48
MBD4-203ENST00000429544 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
MBD4-203ENST00000429544 FOXI2Q6ZQN5 318 aa12.06□□□□□ -0.48
MBD4-203ENST00000429544 SMIM17P0DL12 118 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 CDKN1BP46527 198 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 TCTAP57738 103 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 OR9G4Q8NGQ1 327 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 JPT2Q9H910 190 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 PEMTQ9UBM1 199 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
MBD4-203ENST00000429544 AKAP9Q99996 3911 aa12.05□□□□□ -0.48
MBD4-203ENST00000429544 KNCNA6PVL3 124 aa12.04□□□□□ -0.48
MBD4-203ENST00000429544 SUMO2P61956 95 aaKnown RBP12.04□□□□□ -0.48
MBD4-203ENST00000429544 DLX4Q92988 240 aaPredicted RBP12.04□□□□□ -0.48
MBD4-203ENST00000429544 ESM1Q9NQ30 184 aa12.04□□□□□ -0.48
MBD4-203ENST00000429544 PDZD2O15018 2839 aa12.04□□□□□ -0.48
MBD4-203ENST00000429544 PRSS1P07477 247 aa12.04□□□□□ -0.48
MBD4-203ENST00000429544 COX8AP10176 69 aa12.04□□□□□ -0.48
MBD4-203ENST00000429544 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 G0S2P27469 103 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 DEFB131AP59861 70 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 KRTAP1-1Q07627 177 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 AMTNQ6UX39 209 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 FOXC2Q99958 501 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 NUDT3O95989 172 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 ODF1Q14990 250 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 C20orf78Q9BR46 151 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 KIF25-AS1Q9Y6Z4 181 aa12.03□□□□□ -0.48
MBD4-203ENST00000429544 IGHV1OR15-1A0A075B7D0 117 aa12.02□□□□□ -0.48
MBD4-203ENST00000429544 TMEM61Q8N0U2 210 aa12.02□□□□□ -0.48
MBD4-203ENST00000429544 Q8N1Y9 231 aa12.02□□□□□ -0.48
MBD4-203ENST00000429544 C9orf85Q96MD7 179 aa12.02□□□□□ -0.48
MBD4-203ENST00000429544 YAE1D1Q9NRH1 226 aa12.02□□□□□ -0.48
MBD4-203ENST00000429544 A0A087WWL8 130 aa12.02□□□□□ -0.49
MBD4-203ENST00000429544 ATP5LO75964 103 aa12.02□□□□□ -0.49
MBD4-203ENST00000429544 LINC00315P59091 139 aa12.02□□□□□ -0.49
MBD4-203ENST00000429544 C11orf44Q8N8P7 122 aa12.02□□□□□ -0.49
MBD4-203ENST00000429544 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.49
MBD4-203ENST00000429544 ZNF25P17030 456 aaPredicted RBP12.01□□□□□ -0.49
MBD4-203ENST00000429544 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
MBD4-203ENST00000429544 ZNF124Q15973 351 aa12.01□□□□□ -0.49
MBD4-203ENST00000429544 MPV17L2Q567V2 206 aa12.01□□□□□ -0.49
MBD4-203ENST00000429544 A0A1W2PRX2 142 aa12□□□□□ -0.49
MBD4-203ENST00000429544 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
MBD4-203ENST00000429544 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
MBD4-203ENST00000429544 FGF6P10767 208 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 PPP1R17O96001 155 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 HLA-DRB4P13762 266 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 C2orf91Q6ZV80 131 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 CSTL1Q9H114 145 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 ZMAT4Q9H898 229 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 HLA-DRB4X5D2U9 266 aa11.99□□□□□ -0.49
MBD4-203ENST00000429544 TRAV2A0A0B4J234 112 aa11.98□□□□□ -0.49
MBD4-203ENST00000429544 F5H697 171 aa11.98□□□□□ -0.49
MBD4-203ENST00000429544 RBMY1A1P0DJD3 496 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms