RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 COL4A6Q14031 1691 aa9.96□□□□□ -0.81
LDB3-205ENST00000429277 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.81
LDB3-205ENST00000429277 TMEM258P61165 79 aa9.96□□□□□ -0.81
LDB3-205ENST00000429277 CLPSL2Q6UWE3 100 aa9.96□□□□□ -0.81
LDB3-205ENST00000429277 GYPEP15421 78 aa9.96□□□□□ -0.81
LDB3-205ENST00000429277 ZNF503Q96F45 646 aa9.96□□□□□ -0.81
LDB3-205ENST00000429277 CTSGP08311 255 aa9.96□□□□□ -0.82
LDB3-205ENST00000429277 TM2D2Q9BX73 214 aa9.96□□□□□ -0.82
LDB3-205ENST00000429277 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.82
LDB3-205ENST00000429277 IGKV1-17P01599 117 aa9.96□□□□□ -0.82
LDB3-205ENST00000429277 WIPF3A6NGB9 483 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.82
LDB3-205ENST00000429277 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 Q71RC1 249 aaPredicted RBP9.95□□□□□ -0.82
LDB3-205ENST00000429277 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 TSC2P49815 1807 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 NTN5Q8WTR8 489 aaPredicted RBP9.95□□□□□ -0.82
LDB3-205ENST00000429277 H3BMG7 143 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 SLURP1P55000 103 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
LDB3-205ENST00000429277 RNASE13Q5GAN3 156 aaKnown RBP9.94□□□□□ -0.82
LDB3-205ENST00000429277 Q6ZQT7 251 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 Q8N9W7 124 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 TINCRA0A1B0GVN0 87 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 NDUFB1O75438 58 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 NBASA2RRP1 2371 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 INSL3P51460 131 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 TIRAPP58753 221 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
LDB3-205ENST00000429277 NOTCH3Q9UM47 2321 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 WI2-2373I1.2A0A1W2PRP0 233 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
LDB3-205ENST00000429277 MALRD1Q5VYJ5 2156 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 TRBV6-1A0A0K0K1D8 114 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 HEATR5AQ86XA9 2040 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 Q9HAA7 133 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 NDUFA1O15239 70 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
LDB3-205ENST00000429277 CRYBA4P53673 196 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 RPL18AQ02543 176 aaKnown RBP9.93□□□□□ -0.82
LDB3-205ENST00000429277 DEFB136Q30KP8 78 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
LDB3-205ENST00000429277 TANC1Q9C0D5 1861 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 FBXL19-AS1Q494R0 122 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 APRG1Q8IVJ8 170 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 NDUFS5O43920 106 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 C2orf70A6NJV1 201 aa9.92□□□□□ -0.82
LDB3-205ENST00000429277 K7ERJ3 54 aa9.91□□□□□ -0.82
LDB3-205ENST00000429277 HIST2H2BCQ6DN03 193 aa9.91□□□□□ -0.82
LDB3-205ENST00000429277 DEFB125Q8N687 156 aa9.91□□□□□ -0.82
LDB3-205ENST00000429277 C4orf3Q8WVX3 66 aa9.91□□□□□ -0.82
LDB3-205ENST00000429277 IGHG2P01859 326 aa9.91□□□□□ -0.82
LDB3-205ENST00000429277 WT1P19544 449 aaPredicted RBP9.9□□□□□ -0.82
LDB3-205ENST00000429277 KIR2DL5BA0A0G2JN68 375 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 KIR2DL5BA0A0G2JPC4 375 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 BLCAPP62952 87 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 KIR2DL5AQ8N109 375 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 MRAPQ8TCY5 172 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 FGF23Q9GZV9 251 aaPredicted RBP9.9□□□□□ -0.82
LDB3-205ENST00000429277 HIGD1BQ9P298 99 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 NLRC5Q86WI3 1866 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 IGLV1-47P01700 117 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
LDB3-205ENST00000429277 PATE2Q6UY27 113 aa9.9□□□□□ -0.83
LDB3-205ENST00000429277 JMJD7-PLA2G4BH0Y9G9 81 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
LDB3-205ENST00000429277 AMTNQ6UX39 209 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 RPL39LQ96EH5 51 aaKnown RBP9.89□□□□□ -0.83
LDB3-205ENST00000429277 IGHV4OR15-8A0A075B7B6 117 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 A0A087WW49 117 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 ADORA2A-AS1P86434 159 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 CLPSL1A2RUU4 121 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 CTRLP40313 264 aa9.89□□□□□ -0.83
LDB3-205ENST00000429277 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 MP68P56378 58 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 DEFB105AQ8NG35 78 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 DOCK9Q9BZ29 2069 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 PCP2Q8IVA1 136 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 NPSP0C0P6 89 aa9.88□□□□□ -0.83
LDB3-205ENST00000429277 GTF3C1Q12789 2109 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 IGLL5B9A064 214 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 Q8N1Y9 231 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 TOMM6Q96B49 74 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 IGLV2-23P01705 113 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms