RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 SOCS3O14543 225 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 SH2D1AO60880 128 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 CAMPP49913 170 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 ZNF138P52744 262 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 PKIAP61925 76 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 ZNF575Q86XF7 245 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 BORCS7Q96B45 105 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 KCNS1Q96KK3 526 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 FAM110AQ9BQ89 295 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 CNFNQ9BYD5 112 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 RETNQ9HD89 108 aa6.41□□□□□ -1.38
HDAC1-202ENST00000428704 IGHV3OR16-8A0A075B7F1 116 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 LOC102724200A0A096LPH7 203 aaPredicted RBP6.4□□□□□ -1.38
HDAC1-202ENST00000428704 IGHV7-4-1A0A0J9YVY3 117 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 TMEM213A2RRL7 107 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 C2orf70A6NJV1 201 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 ZNF705FA8MVS1 300 aaPredicted RBP6.4□□□□□ -1.38
HDAC1-202ENST00000428704 A8MZ25 164 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 F2Z2F3 143 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 LGALS9O00182 355 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 ZNF324O75467 553 aaPredicted RBP6.4□□□□□ -1.38
HDAC1-202ENST00000428704 IGLC6P0CF74 106 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 RAB4AP20338 218 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 HLA-DMBP28068 263 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 CTRLP40313 264 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 HIST1H1AQ02539 215 aaPredicted RBP6.4□□□□□ -1.38
HDAC1-202ENST00000428704 FAM106AQ4KMX7 169 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 UNQ9165/PRO28630Q6UXU0 137 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 CHCHD1Q96BP2 118 aaKnown RBP6.4□□□□□ -1.38
HDAC1-202ENST00000428704 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 SMPXQ9UHP9 88 aa6.4□□□□□ -1.38
HDAC1-202ENST00000428704 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
HDAC1-202ENST00000428704 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 ARMS2P0C7Q2 107 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 PMCHP20382 165 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 ZNF80P51504 273 aaPredicted RBP6.39□□□□□ -1.39
HDAC1-202ENST00000428704 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
HDAC1-202ENST00000428704 TMEM78Q5T7P6 136 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 IGFL4Q6B9Z1 124 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 Q6ZWC4 215 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 C16orf92Q96LL3 132 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 SAMD10Q9BYL1 202 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 DAZ1Q9NQZ3 744 aaKnown RBP6.39□□□□□ -1.39
HDAC1-202ENST00000428704 UFC1Q9Y3C8 167 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 SELENOKQ9Y6D0 94 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
HDAC1-202ENST00000428704 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 NUPR2A6NF83 97 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 TSTD3H0UI37 97 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 ZNF207O43670 478 aaKnown RBP6.38□□□□□ -1.39
HDAC1-202ENST00000428704 DEFB114Q30KQ6 69 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 LYZL1Q6UWQ5 148 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 NIT1Q86X76 327 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 ZNF664Q8N3J9 261 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 OR2K2Q8NGT1 345 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 FAM19A4Q96LR4 140 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 RHPN1-AS1Q9BWJ2 59 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 NRN1Q9NPD7 142 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 NAGKQ9UJ70 344 aa6.38□□□□□ -1.39
HDAC1-202ENST00000428704 IGHV4-4A0A075B6R2 117 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 IGHV3OR16-13A0A075B7E8 117 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 IGHV3-74A0A0B4J1X5 117 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 LINC00587B1AMM8 73 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 HSBP1O75506 76 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 OR5AL1P0C617 328 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 LINC00614P0C842 121 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 AMTP48728 403 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 CTAG1AP78358 180 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 ERCC8Q13216 396 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 TM4SF20Q53R12 229 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 FAM104BQ5XKR9 115 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 TEX43Q6ZNM6 134 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 TMEM61Q8N0U2 210 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 RNF182Q8N6D2 247 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 FER1L6-AS1Q8NA97 138 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 Q8TAT8 98 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
HDAC1-202ENST00000428704 MUC4Q99102 2169 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 IGHV3-49A0A0A0MS15 119 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 IGKV3D-20A0A0C4DH25 116 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 SCGB1D1O95968 90 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 CD7P09564 240 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 DYNLRB2Q8TF09 96 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 DNAH17Q9UFH2 4485 aa6.36□□□□□ -1.39
HDAC1-202ENST00000428704 CRXO43186 299 aaPredicted RBP6.35□□□□□ -1.39
HDAC1-202ENST00000428704 SNAI2O43623 268 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 ORM1P02763 201 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms