RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 C14orf178Q8N769 122 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-210ENST00000428307 DYNLRB2Q8TF09 96 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 A0A096LNJ9 63 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 C7orf71A4D174 169 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 RNASE1P07998 156 aaKnown RBP7.74□□□□□ -1.17
HDAC9-210ENST00000428307 CDKN1BP46527 198 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 ZNF705AQ6ZN79 300 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-210ENST00000428307 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 NDUFAF3Q9BU61 184 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 MAP1LC3CQ9BXW4 147 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 HSPB8Q9UJY1 196 aa7.74□□□□□ -1.17
HDAC9-210ENST00000428307 ANK3Q12955 4377 aaKnown RBP7.73□□□□□ -1.17
HDAC9-210ENST00000428307 CCL24O00175 119 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 LEPP41159 167 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 CD300EQ496F6 205 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-210ENST00000428307 FOXI2Q6ZQN5 318 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 ZNF418Q8TF45 676 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-210ENST00000428307 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 CRXO43186 299 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-210ENST00000428307 DEFB114Q30KQ6 69 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 OR2K2Q8NGT1 345 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 SCRT2Q9NQ03 307 aa7.73□□□□□ -1.17
HDAC9-210ENST00000428307 SETXQ7Z333 2677 aaKnown RBP7.72□□□□□ -1.17
HDAC9-210ENST00000428307 LY6G6DO95868 133 aa7.72□□□□□ -1.17
HDAC9-210ENST00000428307 HTN1P15515 57 aa7.72□□□□□ -1.17
HDAC9-210ENST00000428307 MDFICQ9P1T7 246 aa7.72□□□□□ -1.17
HDAC9-210ENST00000428307 OR4C46A6NHA9 309 aa7.71□□□□□ -1.17
HDAC9-210ENST00000428307 DUSP14O95147 198 aaKnown RBP7.71□□□□□ -1.17
HDAC9-210ENST00000428307 TSPOP30536 169 aa7.71□□□□□ -1.17
HDAC9-210ENST00000428307 HILS1P60008 231 aa7.71□□□□□ -1.17
HDAC9-210ENST00000428307 SCGB2A2Q13296 93 aa7.71□□□□□ -1.17
HDAC9-210ENST00000428307 JPT2Q9H910 190 aa7.71□□□□□ -1.17
HDAC9-210ENST00000428307 LAMTOR2Q9Y2Q5 125 aa7.71□□□□□ -1.17
HDAC9-210ENST00000428307 MGPP08493 103 aa7.71□□□□□ -1.18
HDAC9-210ENST00000428307 AMTNQ6UX39 209 aa7.71□□□□□ -1.18
HDAC9-210ENST00000428307 Q8N1Y9 231 aa7.71□□□□□ -1.18
HDAC9-210ENST00000428307 NRACQ8N912 160 aa7.71□□□□□ -1.18
HDAC9-210ENST00000428307 ODF3Q96PU9 254 aa7.71□□□□□ -1.18
HDAC9-210ENST00000428307 HBDP02042 147 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 CTAG1AP78358 180 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 DPH3P1Q9H4G8 78 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 TSSC4Q9Y5U2 329 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-210ENST00000428307 TRAV9-2A0A087WT02 112 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 C20orf202A1L168 122 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 H3BMM0 161 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 C18orf15Q96N68 181 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 C16orf95Q9H693 158 aa7.7□□□□□ -1.18
HDAC9-210ENST00000428307 NXT2Q9NPJ8 142 aaKnown RBP7.7□□□□□ -1.18
HDAC9-210ENST00000428307 A0A087WWL8 130 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 hDV102S1A0JD36 115 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 TCAPO15273 167 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 MED14OSP0DP75 135 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 IGLL1P15814 213 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 FHL3Q13643 280 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 PET117Q6UWS5 81 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 MAP6D1Q9H9H5 199 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 IGHV1OR15-1A0A075B7D0 117 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 IGHV3-16A0A0C4DH30 117 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 PRM2P04554 102 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 HLA-DRB4P13762 266 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
HDAC9-210ENST00000428307 HLA-DRB4X5D2U9 266 aa7.69□□□□□ -1.18
HDAC9-210ENST00000428307 IGLV2-18A0A075B6J9 118 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RBMY1BA6NDE4 496 aaKnown RBP7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RBMY1EA6NEQ0 496 aaKnown RBP7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RBMY1DP0C7P1 496 aaKnown RBP7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RBMY1A1P0DJD3 496 aaKnown RBP7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RBMY1CP0DJD4 496 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 IGLC3P0DOY3 106 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
HDAC9-210ENST00000428307 Q8N8P6 123 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 RASL10AQ92737 203 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 MRAP2Q96G30 205 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 ZNF256Q9Y2P7 627 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-210ENST00000428307 MUC4Q99102 2169 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 SMIM17P0DL12 118 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 NSUN5P1Q3KNT7 163 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 TMEM158Q8WZ71 300 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 TMEM160Q9NX00 188 aa7.68□□□□□ -1.18
HDAC9-210ENST00000428307 JMJD1CQ15652 2540 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 NOTCH3Q9UM47 2321 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 FN1P02751 2386 aaKnown RBP7.67□□□□□ -1.18
HDAC9-210ENST00000428307 CBY3A6NI87 242 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 INAFM1C9JVW0 142 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 F5H697 171 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 FCER1GP30273 86 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 FAM74A4Q5TZK3 123 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 IFI27L1Q96BM0 104 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 SPAG8Q99932 426 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-210ENST00000428307 FLNBO75369 2602 aaKnown RBP7.67□□□□□ -1.18
HDAC9-210ENST00000428307 TRAV2A0A0B4J234 112 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 EREGO14944 169 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 HIVEP1P15822 2718 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 DEFB104AQ8WTQ1 72 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms