RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 GAGE2AQ6NT46 116 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 Q8N8P6 123 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 ZNF462Q96JM2 2506 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 FASNP49327 2511 aaKnown RBP7.57□□□□□ -1.2
SNX13-203ENST00000428135 DNAJC9-AS1A6NH13 148 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 KIR3DS1Q14943 382 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 SIGLEC8Q9NYZ4 499 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 SUMO4Q6EEV6 95 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 TMEM14CQ9P0S9 112 aa7.57□□□□□ -1.2
SNX13-203ENST00000428135 LINC01549A6NIU2 74 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 K7EIM0 57 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 CFPP27918 469 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
SNX13-203ENST00000428135 C9JAW5 83 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 SCRT2Q9NQ03 307 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 IGHV1-24A0A0C4DH33 117 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 K7EN84 100 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
SNX13-203ENST00000428135 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 PRAC2D3DTV9 90 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 I3L2K1 104 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 DAZAP2Q15038 168 aaPredicted RBP7.55□□□□□ -1.2
SNX13-203ENST00000428135 RHOHQ15669 191 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 PYY3Q5JQD4 70 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 MRPL35Q9NZE8 188 aaKnown RBP7.55□□□□□ -1.2
SNX13-203ENST00000428135 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 C2orf70A6NJV1 201 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 CTSGP08311 255 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 RPL32P62910 135 aaKnown RBP7.55□□□□□ -1.2
SNX13-203ENST00000428135 SMR3AQ99954 134 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 KLF12Q9Y4X4 402 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 TANC2Q9HCD6 1990 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 IGLL5B9A064 214 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 DEFB125Q8N687 156 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 H3BUA1 57 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 NPBQ8NG41 125 aa7.55□□□□□ -1.2
SNX13-203ENST00000428135 NCOA6Q14686 2063 aaPredicted RBP7.54□□□□□ -1.2
SNX13-203ENST00000428135 DSCAMO60469 2012 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 NDUFA12Q9UI09 145 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 PCP4P48539 62 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 CDSNQ15517 529 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 PRR20EP86478 221 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 PRR20CP86479 221 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 PRR20DP86480 221 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 PRR20BP86481 221 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 PRR20AP86496 221 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 UTF1Q5T230 341 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 IGLV11-55A0A075B6I3 123 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 TAL2Q16559 108 aa7.54□□□□□ -1.2
SNX13-203ENST00000428135 SPART-AS1P0CW21 52 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 RMI2Q96E14 147 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 TMEM141Q96I45 108 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 PYGO2Q9BRQ0 406 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 C1orf43Q9BWL3 253 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 DKK2Q9UBU2 259 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 PCNX3Q9H6A9 2034 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 A8MWP6 167 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 BUB3O43684 328 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 TMEM190Q8WZ59 177 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 IGKV1-17P01599 117 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 CCL18P55774 89 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 ZNF664Q8N3J9 261 aa7.53□□□□□ -1.2
SNX13-203ENST00000428135 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.2
SNX13-203ENST00000428135 AMTNQ6UX39 209 aa7.52□□□□□ -1.2
SNX13-203ENST00000428135 CLPSL1A2RUU4 121 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 POU2AF1Q16633 256 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 LTAP01374 205 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 RNF138Q8WVD3 245 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 FAM110AQ9BQ89 295 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 MRPL36Q9P0J6 103 aaKnown RBP7.52□□□□□ -1.21
SNX13-203ENST00000428135 KRTAP27-1Q3LI81 207 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 CRYGCP07315 174 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 Q8N1Y9 231 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 SIRPDQ9H106 197 aa7.52□□□□□ -1.21
SNX13-203ENST00000428135 MAJINQ3KP22 176 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 SMAD5-AS1Q9Y6J3 95 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 C8orf31Q8N9H6 132 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 ICOSQ9Y6W8 199 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 ATP5G1P05496 136 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 IGHV4-31P0DP07 118 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 KRTAP10-9P60411 292 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 ATP6V0E2Q8NHE4 81 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 MED12LQ86YW9 2145 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 RS1O15537 224 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 ODF3L1Q8IXM7 274 aa7.51□□□□□ -1.21
SNX13-203ENST00000428135 BBC3Q96PG8 261 aaPredicted RBP7.51□□□□□ -1.21
SNX13-203ENST00000428135 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
SNX13-203ENST00000428135 TEX22C9J3V5 150 aa7.5□□□□□ -1.21
SNX13-203ENST00000428135 K7ERJ3 54 aa7.5□□□□□ -1.21
SNX13-203ENST00000428135 C16orf54Q6UWD8 224 aa7.5□□□□□ -1.21
SNX13-203ENST00000428135 C16orf74Q96GX8 76 aa7.5□□□□□ -1.21
SNX13-203ENST00000428135 LY6G6DO95868 133 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms