RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 C9JCJ5 164 aa10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 FUSP35637 526 aaKnown RBP eCLIP10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SAPCD1Q5SSQ6 148 aa10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 AKR1C8PQ5T2L2 129 aa10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 PARLQ9H300 379 aa10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 JPT2Q9H910 190 aa10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 DNAH8Q96JB1 4490 aa10.76□□□□□ -0.69
HLA-DQB2-230ENST00000427449 TRBV6-4A0A1B0GX49 114 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 KRBOX1C9JBD0 128 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 K7EQM0 130 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 LTAP01374 205 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 PIK3CD-AS1Q5SR53 167 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 MBD3L1Q8WWY6 194 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 HIST1H2BAQ96A08 127 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SH2D1AO60880 128 aa10.74□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SEC11BP0C7V7 166 aa10.74□□□□□ -0.69
HLA-DQB2-230ENST00000427449 ZNF674Q2M3X9 581 aa10.74□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SAMD10Q9BYL1 202 aa10.74□□□□□ -0.69
HLA-DQB2-230ENST00000427449 IL36BQ9NZH7 164 aa10.74□□□□□ -0.69
HLA-DQB2-230ENST00000427449 FAT1Q14517 4588 aa10.74□□□□□ -0.69
HLA-DQB2-230ENST00000427449 VPS13BQ7Z7G8 4022 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 IGHV3-73A0A0B4J1V6 119 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 BCL2L11O43521 198 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 ZFP69Q49AA0 526 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 Q8N3U1 123 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 TXNDC17Q9BRA2 123 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 LY96Q9Y6Y9 160 aa10.73□□□□□ -0.69
HLA-DQB2-230ENST00000427449 LINC01559Q495D7 138 aa10.72□□□□□ -0.69
HLA-DQB2-230ENST00000427449 FMC1Q96HJ9 113 aa10.72□□□□□ -0.69
HLA-DQB2-230ENST00000427449 MLST8Q9BVC4 326 aa10.72□□□□□ -0.69
HLA-DQB2-230ENST00000427449 A0A087WTM6 91 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 FABP5P3A8MUU1 101 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 H3BVH4 76 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 CIDEAO60543 219 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 IFNA7P01567 189 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 RHOHQ15669 191 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 LINC01556Q5JQF7 62 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 ZFP2Q6ZN57 461 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 PCNPQ8WW12 178 aaKnown RBP10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 TCEAL7Q9BRU2 100 aa10.71□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SCO2A0A1W2PP80 73 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 LRCOL1A6NCL2 159 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 K7EP13 123 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 PAGE4O60829 102 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 MGST1P10620 155 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 MSRB1Q9NZV6 116 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
HLA-DQB2-230ENST00000427449 B4DEV8 164 aa10.69□□□□□ -0.7
HLA-DQB2-230ENST00000427449 M0R036 132 aa10.69□□□□□ -0.7
HLA-DQB2-230ENST00000427449 ASIPP42127 132 aa10.69□□□□□ -0.7
HLA-DQB2-230ENST00000427449 PPT1P50897 306 aa10.69□□□□□ -0.7
HLA-DQB2-230ENST00000427449 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 A0A0D9SG52 128 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 GRIFINA4D1Z8 144 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 CRYGDP07320 174 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 CCL20P78556 96 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 LELP1Q5T871 98 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 SH2D6Q7Z4S9 175 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 NHLRC2Q8NBF2 726 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 FAM213BQ8TBF2 198 aa10.68□□□□□ -0.7
HLA-DQB2-230ENST00000427449 A8MWV9 139 aa10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 IBA57-AS1B1ANH7 110 aa10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 UMAD1C9J7I0 102 aa10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 XGP55808 180 aa10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 TMUB2Q71RG4 321 aa10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 ZNF471Q9BX82 626 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB2-230ENST00000427449 A0A1B0GV50 99 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 KRTAP10-1P60331 282 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 RPL19P84098 196 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 LGALSLQ3ZCW2 172 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 Q8N1X5 172 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 MAPKAPK5-AS1Q8N8E1 139 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 SFT2D1Q8WV19 159 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 C11orf52Q96A22 123 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 SFRP2Q96HF1 295 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 GTSF1LQ9H1H1 148 aa10.66□□□□□ -0.7
HLA-DQB2-230ENST00000427449 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 EVI2AP22794 236 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 AKR1C3P42330 323 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 ERVFC1-1P60608 527 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 CST9LP1Q5W188 147 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 NFE4Q86UQ8 179 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 DERL1Q9BUN8 251 aa10.65□□□□□ -0.7
HLA-DQB2-230ENST00000427449 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 CXCL1P09341 107 aa10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 UBE2G1P62253 170 aa10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 WFDC2Q14508 124 aa10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 CDPF1Q6NVV7 123 aa10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 ATP6V0E2Q8NHE4 81 aa10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 SSBP4Q9BWG4 385 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB2-230ENST00000427449 TMSB15BA0A087X1C1 80 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 KANTRA0A1W2PQU2 76 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms