RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 C7orf71A4D174 169 aa14.4□□□□□ -0.1
SNX17-202ENST00000427123 RASL10AQ92737 203 aa14.4□□□□□ -0.1
SNX17-202ENST00000427123 FAM208BQ5VWN6 2430 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 A0A0J9YX75 114 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 MGPP08493 103 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 NPSP0C0P6 89 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 SUMO2P61956 95 aaKnown RBP14.39□□□□□ -0.11
SNX17-202ENST00000427123 BOD1L2Q8IYS8 172 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 Q8N2B8 174 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 POM121L12Q8N7R1 296 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 FOXC2Q99958 501 aa14.39□□□□□ -0.11
SNX17-202ENST00000427123 K7EMI3 77 aa14.38□□□□□ -0.11
SNX17-202ENST00000427123 PPP1R17O96001 155 aa14.38□□□□□ -0.11
SNX17-202ENST00000427123 ORMDL2Q53FV1 153 aa14.38□□□□□ -0.11
SNX17-202ENST00000427123 ZFYVE26Q68DK2 2539 aa14.38□□□□□ -0.11
SNX17-202ENST00000427123 TRAV12-3A0A0B4J271 114 aa14.37□□□□□ -0.11
SNX17-202ENST00000427123 IGKCP01834 107 aa14.37□□□□□ -0.11
SNX17-202ENST00000427123 OR9G4Q8NGQ1 327 aa14.37□□□□□ -0.11
SNX17-202ENST00000427123 KRTAP1-3Q8IUG1 177 aa14.36□□□□□ -0.11
SNX17-202ENST00000427123 RPL39LQ96EH5 51 aaKnown RBP14.36□□□□□ -0.11
SNX17-202ENST00000427123 DPM2O94777 84 aa14.36□□□□□ -0.11
SNX17-202ENST00000427123 WFDC12Q8WWY7 111 aa14.36□□□□□ -0.11
SNX17-202ENST00000427123 SIVA1O15304 175 aa14.35□□□□□ -0.11
SNX17-202ENST00000427123 DUSP14O95147 198 aaKnown RBP14.35□□□□□ -0.11
SNX17-202ENST00000427123 CD7P09564 240 aa14.35□□□□□ -0.11
SNX17-202ENST00000427123 NMUP48645 174 aa14.35□□□□□ -0.11
SNX17-202ENST00000427123 KIF25-AS1Q9Y6Z4 181 aa14.35□□□□□ -0.11
SNX17-202ENST00000427123 LRRK2Q5S007 2527 aa14.35□□□□□ -0.11
SNX17-202ENST00000427123 MAP1AP78559 2803 aaPredicted RBP14.35□□□□□ -0.11
SNX17-202ENST00000427123 USP9YO00507 2555 aaPredicted RBP14.34□□□□□ -0.11
SNX17-202ENST00000427123 CSMD2Q7Z408 3487 aa14.34□□□□□ -0.11
SNX17-202ENST00000427123 Q6ZVH6 145 aa14.34□□□□□ -0.11
SNX17-202ENST00000427123 DUX5Q96PT3 197 aa14.34□□□□□ -0.11
SNX17-202ENST00000427123 TCTAP57738 103 aa14.34□□□□□ -0.11
SNX17-202ENST00000427123 HHLA3Q9XRX5 114 aa14.34□□□□□ -0.11
SNX17-202ENST00000427123 MUC4Q99102 2169 aa14.33□□□□□ -0.12
SNX17-202ENST00000427123 CDKN1BP46527 198 aa14.33□□□□□ -0.12
SNX17-202ENST00000427123 TMEM97Q5BJF2 176 aa14.33□□□□□ -0.12
SNX17-202ENST00000427123 FOXI2Q6ZQN5 318 aa14.33□□□□□ -0.12
SNX17-202ENST00000427123 POLQO75417 2590 aa14.33□□□□□ -0.12
SNX17-202ENST00000427123 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.32□□□□□ -0.12
SNX17-202ENST00000427123 LINC00315P59091 139 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 TOMM6Q96B49 74 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 C9orf85Q96MD7 179 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 A0A087WX48 190 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 IGHV3-16A0A0C4DH30 117 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 TAX1BP3O14907 124 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 IGKV3-20P01619 116 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 ZNF124Q15973 351 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 TCTEX1D4Q5JR98 221 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 PCP2Q8IVA1 136 aa14.32□□□□□ -0.12
SNX17-202ENST00000427123 RPL32P62910 135 aaKnown RBP14.31□□□□□ -0.12
SNX17-202ENST00000427123 SEC11AP67812 179 aa14.31□□□□□ -0.12
SNX17-202ENST00000427123 MRPL35Q9NZE8 188 aaKnown RBP14.31□□□□□ -0.12
SNX17-202ENST00000427123 TRAV12-2A0A075B6T6 113 aa14.31□□□□□ -0.12
SNX17-202ENST00000427123 TRAV12-1A0A0B4J245 112 aa14.31□□□□□ -0.12
SNX17-202ENST00000427123 SLURP1P55000 103 aa14.31□□□□□ -0.12
SNX17-202ENST00000427123 HSD52Q0P140 79 aa14.31□□□□□ -0.12
SNX17-202ENST00000427123 ADAMTSL5Q6ZMM2 481 aa14.31□□□□□ -0.12
SNX17-202ENST00000427123 SPINK13Q1W4C9 94 aa14.3□□□□□ -0.12
SNX17-202ENST00000427123 C18orf65Q6ZTR6 163 aa14.3□□□□□ -0.12
SNX17-202ENST00000427123 TMEM86BQ8N661 226 aa14.3□□□□□ -0.12
SNX17-202ENST00000427123 TEX29Q8N6K0 151 aa14.3□□□□□ -0.12
SNX17-202ENST00000427123 CSTL1Q9H114 145 aa14.3□□□□□ -0.12
SNX17-202ENST00000427123 IGHV1OR15-1A0A075B7D0 117 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 LINC01619G3V211 115 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 HLA-DRB4P13762 266 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 PLNP26678 52 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 DEFB136Q30KP8 78 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 SYT8Q8NBV8 401 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 C4orf3Q8WVX3 66 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 SCGB3A1Q96QR1 104 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 HLA-DRB4X5D2U9 266 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 PTPN13Q12923 2485 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 ZC2HC1BQ5TFG8 222 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 SUMO4Q6EEV6 95 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 TMEM160Q9NX00 188 aa14.29□□□□□ -0.12
SNX17-202ENST00000427123 IGKV2D-26A0A0A0MRZ7 120 aa14.28□□□□□ -0.12
SNX17-202ENST00000427123 AMTNQ6UX39 209 aa14.28□□□□□ -0.12
SNX17-202ENST00000427123 JPT2Q9H910 190 aa14.28□□□□□ -0.12
SNX17-202ENST00000427123 ZANQ9Y493 2812 aa14.27□□□□□ -0.12
SNX17-202ENST00000427123 UBE2V1Q13404 147 aa14.27□□□□□ -0.12
SNX17-202ENST00000427123 C2orf66Q6UXQ4 117 aa14.27□□□□□ -0.12
SNX17-202ENST00000427123 Q8N1Y9 231 aa14.27□□□□□ -0.12
SNX17-202ENST00000427123 PEMTQ9UBM1 199 aa14.27□□□□□ -0.12
SNX17-202ENST00000427123 TRAV2A0A0B4J234 112 aa14.27□□□□□ -0.13
SNX17-202ENST00000427123 H7C1H1 209 aa14.27□□□□□ -0.13
SNX17-202ENST00000427123 PTTG1IPP53801 180 aa14.27□□□□□ -0.13
SNX17-202ENST00000427123 GTSCR1Q86UQ5 136 aa14.27□□□□□ -0.13
SNX17-202ENST00000427123 MDFICQ9P1T7 246 aa14.27□□□□□ -0.13
SNX17-202ENST00000427123 NAV2Q8IVL1 2488 aa14.26□□□□□ -0.13
SNX17-202ENST00000427123 A0A087WWL8 130 aa14.26□□□□□ -0.13
SNX17-202ENST00000427123 F8VRH5 84 aa14.26□□□□□ -0.13
SNX17-202ENST00000427123 OR11H1Q8NG94 326 aa14.25□□□□□ -0.13
SNX17-202ENST00000427123 HIGD1BQ9P298 99 aa14.25□□□□□ -0.13
SNX17-202ENST00000427123 DOPEY2Q9Y3R5 2298 aa14.25□□□□□ -0.13
SNX17-202ENST00000427123 CCL25O15444 150 aa14.25□□□□□ -0.13
SNX17-202ENST00000427123 NEXN-AS1Q8NBZ9 246 aa14.25□□□□□ -0.13
SNX17-202ENST00000427123 TRGV11A0A075B6L2 103 aa14.24□□□□□ -0.13
SNX17-202ENST00000427123 A6NDN8 102 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms