RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 Q6ZS46 218 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 SPANXB1Q9NS25 103 aaPredicted RBP10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 SORL1Q92673 2214 aa10.71□□□□□ -0.7
TPM3P9-201ENST00000424846 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.7
TPM3P9-201ENST00000424846 KLHL30-AS1Q8NEE0 82 aa10.71□□□□□ -0.7
TPM3P9-201ENST00000424846 PHLDA3Q9Y5J5 127 aa10.71□□□□□ -0.7
TPM3P9-201ENST00000424846 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 MYMXA0A1B0GTQ4 84 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 LY6EQ16553 131 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 PSMG4Q5JS54 123 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 C9orf139Q6ZV77 190 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 DUSP14O95147 198 aaKnown RBP10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 MORN3Q6PF18 240 aaPredicted RBP10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
TPM3P9-201ENST00000424846 TRAV12-1A0A0B4J245 112 aa10.69□□□□□ -0.7
TPM3P9-201ENST00000424846 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
TPM3P9-201ENST00000424846 TSSC4Q9Y5U2 329 aaPredicted RBP10.69□□□□□ -0.7
TPM3P9-201ENST00000424846 TRAV21A0A0B4J279 112 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 CRYGDP07320 174 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 KLRB1Q12918 225 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 RRN3P1Q2M238 152 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 TSHBP01222 138 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 ASIPP42127 132 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 ORMDL2Q53FV1 153 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 CUBNO60494 3623 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 C19orf84I3L1E1 186 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 SLC25A16P16260 332 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
TPM3P9-201ENST00000424846 UTP20O75691 2785 aaKnown RBP10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 TAL2Q16559 108 aa10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 CD300EQ496F6 205 aaPredicted RBP10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 MOB4Q9Y3A3 225 aa10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 AZU1P20160 251 aa10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 LINC00315P59091 139 aa10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 RPL39P62891 51 aaKnown RBP10.67□□□□□ -0.7
TPM3P9-201ENST00000424846 DOPEY2Q9Y3R5 2298 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 BLCAPP62952 87 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 SMAGPQ0VAQ4 97 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 ZNF815PA8K554 130 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 LENEPQ9Y5L5 61 aa10.66□□□□□ -0.7
TPM3P9-201ENST00000424846 A0A087WWL8 130 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 ZANQ9Y493 2812 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 FAM223BA6NKX1 122 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 F8W1H4 67 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 COX6B1P14854 86 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 FAM223AQ8IWN6 122 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 KIF25-AS1Q9Y6Z4 181 aa10.65□□□□□ -0.7
TPM3P9-201ENST00000424846 LY6DQ14210 128 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 IGLV4-69A0A075B6H9 119 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 NDUFA4O00483 81 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 OVOL1O14753 267 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 ZFP2Q6ZN57 461 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 TP53TG1Q9Y2A0 90 aa10.64□□□□□ -0.71
TPM3P9-201ENST00000424846 GAGE12HA6NDE8 117 aa10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 IGHV4-39P01824 125 aa10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 PF4V1P10720 104 aa10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 SCGB2A2Q13296 93 aa10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 SCGB1D4Q6XE38 83 aa10.63□□□□□ -0.71
TPM3P9-201ENST00000424846 IGHV1-69DA0A0B4J2H0 117 aa10.62□□□□□ -0.71
TPM3P9-201ENST00000424846 IGHV4-61A0A0C4DH41 118 aa10.62□□□□□ -0.71
TPM3P9-201ENST00000424846 IGHV1-69P01742 117 aa10.62□□□□□ -0.71
TPM3P9-201ENST00000424846 TMEM95Q3KNT9 176 aa10.62□□□□□ -0.71
TPM3P9-201ENST00000424846 FLNCQ14315 2725 aa10.62□□□□□ -0.71
TPM3P9-201ENST00000424846 SUMO4Q6EEV6 95 aa10.62□□□□□ -0.71
TPM3P9-201ENST00000424846 H3BUX3 64 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 APOMO95445 188 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 CREBBPQ92793 2442 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 IGIPA6NJ69 53 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 IGKV3-20P01619 116 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 CRIP2P52943 208 aaPredicted RBP10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 SRSF9Q13242 221 aaKnown RBP eCLIP10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 PTH2Q96A98 100 aa10.61□□□□□ -0.71
TPM3P9-201ENST00000424846 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
TPM3P9-201ENST00000424846 LINC01619G3V211 115 aa10.6□□□□□ -0.71
TPM3P9-201ENST00000424846 TSPAN13O95857 204 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms