RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 OVOL1O14753 267 aa11.91□□□□□ -0.5
CDH1-202ENST00000422392 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
CDH1-202ENST00000422392 F8VRH5 84 aa11.9□□□□□ -0.5
CDH1-202ENST00000422392 TMEM95Q3KNT9 176 aa11.9□□□□□ -0.5
CDH1-202ENST00000422392 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
CDH1-202ENST00000422392 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
CDH1-202ENST00000422392 USP9XQ93008 2570 aaPredicted RBP11.9□□□□□ -0.5
CDH1-202ENST00000422392 H7C1H1 209 aa11.9□□□□□ -0.5
CDH1-202ENST00000422392 PLNP26678 52 aa11.9□□□□□ -0.5
CDH1-202ENST00000422392 JPT2Q9H910 190 aa11.9□□□□□ -0.5
CDH1-202ENST00000422392 IGHG2P01859 326 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 PSMG4Q5JS54 123 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 OR5A1Q8NGJ0 315 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 TOMM6Q96B49 74 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 ORMDL2Q53FV1 153 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 C2orf66Q6UXQ4 117 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 ATP6V0BQ99437 205 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 CUBNO60494 3623 aa11.89□□□□□ -0.51
CDH1-202ENST00000422392 NEXN-AS1Q8NBZ9 246 aa11.88□□□□□ -0.51
CDH1-202ENST00000422392 USP9YO00507 2555 aaPredicted RBP11.88□□□□□ -0.51
CDH1-202ENST00000422392 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
CDH1-202ENST00000422392 BAALCQ8WXS3 180 aa11.88□□□□□ -0.51
CDH1-202ENST00000422392 FAM19A4Q96LR4 140 aa11.88□□□□□ -0.51
CDH1-202ENST00000422392 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
CDH1-202ENST00000422392 CSTL1Q9H114 145 aa11.88□□□□□ -0.51
CDH1-202ENST00000422392 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 COTL1Q14019 142 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 HLA-DRB4X5D2U9 266 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 IGHV4-30-2A0A087WSY4 118 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 G3V4G9 280 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 C20orf78Q9BR46 151 aa11.87□□□□□ -0.51
CDH1-202ENST00000422392 A6NDX4 124 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 EMP1P54849 157 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 POLQO75417 2590 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 OR11H12B2RN74 326 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 DUSP14O95147 198 aaKnown RBP11.86□□□□□ -0.51
CDH1-202ENST00000422392 AVPP01185 164 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 C12orf74Q32Q52 190 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 OR11H1Q8NG94 326 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 OR11H2Q8NH07 326 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 CCL19Q99731 98 aa11.86□□□□□ -0.51
CDH1-202ENST00000422392 A0A087WWL8 130 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 IGLL5B9A064 214 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 RPL24P83731 157 aaKnown RBP11.85□□□□□ -0.51
CDH1-202ENST00000422392 C10orf99Q6UWK7 81 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
CDH1-202ENST00000422392 CREBBPQ92793 2442 aa11.85□□□□□ -0.51
CDH1-202ENST00000422392 MYO18BQ8IUG5 2567 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 TRAV12-3A0A0B4J271 114 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 ZNF479Q96JC4 524 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 IGSF10Q6WRI0 2623 aa11.84□□□□□ -0.51
CDH1-202ENST00000422392 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 TEX48A0A1B0GUV7 120 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 E9PLD3 99 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 SLC25A16P16260 332 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 ATP5J2P56134 94 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 PRADC1Q9BSG0 188 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 LINC00315P59091 139 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
CDH1-202ENST00000422392 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
CDH1-202ENST00000422392 H3BMG7 143 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
CDH1-202ENST00000422392 CD7P09564 240 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 ANKRD17O75179 2603 aaKnown RBP11.82□□□□□ -0.52
CDH1-202ENST00000422392 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 TSHBP01222 138 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 CRYGDP07320 174 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 CD300EQ496F6 205 aaPredicted RBP11.82□□□□□ -0.52
CDH1-202ENST00000422392 FAM74A4Q5TZK3 123 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
CDH1-202ENST00000422392 KLLNB2CW77 178 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 F5H697 171 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 H3BUA1 57 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 TAL2Q16559 108 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 CLEC2AQ6UVW9 174 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 DCANP1Q8TF63 244 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 NRGNQ92686 78 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 DOPEY1Q5JWR5 2465 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 ZNF688P0C7X2 276 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 WFDC2Q14508 124 aa11.81□□□□□ -0.52
CDH1-202ENST00000422392 MSMBP08118 114 aa11.8□□□□□ -0.52
CDH1-202ENST00000422392 SCGB2A2Q13296 93 aa11.8□□□□□ -0.52
CDH1-202ENST00000422392 FOXI2Q6ZQN5 318 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms