RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 IGFBPL1Q8WX77 278 aa9.63□□□□□ -0.87
CLCN4-203ENST00000421085 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
CLCN4-203ENST00000421085 WNK2Q9Y3S1 2297 aa9.62□□□□□ -0.87
CLCN4-203ENST00000421085 ODF1Q14990 250 aa9.62□□□□□ -0.87
CLCN4-203ENST00000421085 LYPD6Q86Y78 171 aa9.62□□□□□ -0.87
CLCN4-203ENST00000421085 RNF183Q96D59 192 aa9.62□□□□□ -0.87
CLCN4-203ENST00000421085 KAAG1Q9UBP8 84 aa9.62□□□□□ -0.87
CLCN4-203ENST00000421085 SPRNQ5BIV9 151 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 DOCK7Q96N67 2140 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 EML6Q6ZMW3 1958 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 IGHV4-28A0A0C4DH34 117 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 K7EIM0 57 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 WFDC9Q8NEX5 89 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 LY6G6EA0A0G2JKS1 128 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 IGKV1-17P01599 117 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 U3KQA8 63 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 Q6ZQT7 251 aa9.61□□□□□ -0.87
CLCN4-203ENST00000421085 C2orf70A6NJV1 201 aa9.6□□□□□ -0.87
CLCN4-203ENST00000421085 PKDREJQ9NTG1 2253 aa9.6□□□□□ -0.87
CLCN4-203ENST00000421085 CRYGBP07316 175 aa9.6□□□□□ -0.87
CLCN4-203ENST00000421085 HOXB4P17483 251 aaPredicted RBP9.6□□□□□ -0.87
CLCN4-203ENST00000421085 PLXNA2O75051 1894 aa9.6□□□□□ -0.87
CLCN4-203ENST00000421085 LTBP1Q14766 1721 aa9.6□□□□□ -0.87
CLCN4-203ENST00000421085 ZNF407Q9C0G0 2248 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 EP300Q09472 2414 aaPredicted RBP9.59□□□□□ -0.87
CLCN4-203ENST00000421085 TMEM61Q8N0U2 210 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 PRSS33Q8NF86 280 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 TRIOBPQ9H2D6 2365 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 A0A0J9YY99 117 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 C11orf86A6NJI1 115 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 H3BUA1 57 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.87
CLCN4-203ENST00000421085 HIST2H2BCQ6DN03 193 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 Q6ZUT4 128 aa9.59□□□□□ -0.87
CLCN4-203ENST00000421085 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 H3BT86 120 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 KRTAP27-1Q3LI81 207 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
CLCN4-203ENST00000421085 IGKV1OR2-108A0A075B7D4 117 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 TCL1BO95988 128 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 LHBP01229 141 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 IGLV2-14P01704 120 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 Q6ZSR3 168 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 NCOR1O75376 2440 aa9.58□□□□□ -0.88
CLCN4-203ENST00000421085 FNDC1Q4ZHG4 1894 aaPredicted RBP9.57□□□□□ -0.88
CLCN4-203ENST00000421085 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 RLFQ13129 1914 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 CTSGP08311 255 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 LECT2O14960 151 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 CTRLP40313 264 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 FAM215AQ9Y5M1 114 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 IGLV11-55A0A075B6I3 123 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 APOC4P55056 127 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
CLCN4-203ENST00000421085 ELANEP08246 267 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
CLCN4-203ENST00000421085 C11orf1Q9H5F2 150 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 DENND4AQ7Z401 1863 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 BUB3O43684 328 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 NPBQ8NG41 125 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 CLPSL1A2RUU4 121 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 NDUFV3P56181 108 aaKnown RBP9.56□□□□□ -0.88
CLCN4-203ENST00000421085 NREPQ16612 68 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 K7EQD1 137 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 PIFOQ8TCI5 191 aa9.56□□□□□ -0.88
CLCN4-203ENST00000421085 IGHV7-81A0A0B4J1V7 117 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 WI2-2373I1.2A0A1W2PRP0 233 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 UBE2BP63146 152 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 IGFL3Q6UXB1 125 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 IGLV10-54A0A075B6I4 117 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 IGKV2D-24A0A075B6R9 120 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 PLA2G5P39877 138 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 WDR81Q562E7 1941 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 JMJD7-PLA2G4BH0Y9G9 81 aa9.55□□□□□ -0.88
CLCN4-203ENST00000421085 Q71RC1 249 aaPredicted RBP9.55□□□□□ -0.88
CLCN4-203ENST00000421085 NLRC5Q86WI3 1866 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 C16orf54Q6UWD8 224 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 USF3Q68DE3 2245 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 NCR3O14931 201 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 Q8N1Y9 231 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 MP68P56378 58 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 DAZ2Q13117 558 aaKnown RBP9.54□□□□□ -0.88
CLCN4-203ENST00000421085 DAZ4Q86SG3 579 aaKnown RBP9.54□□□□□ -0.88
CLCN4-203ENST00000421085 DAZ3Q9NR90 486 aaKnown RBP9.54□□□□□ -0.88
CLCN4-203ENST00000421085 C9orf47Q6ZRZ4 202 aa9.54□□□□□ -0.88
CLCN4-203ENST00000421085 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
CLCN4-203ENST00000421085 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 DEFB136Q30KP8 78 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 RMI2Q96E14 147 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 Q9HAA7 133 aa9.53□□□□□ -0.88
CLCN4-203ENST00000421085 TNRC6AQ8NDV7 1962 aaKnown RBP9.53□□□□□ -0.88
CLCN4-203ENST00000421085 CNOT1A5YKK6 2376 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms