RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 MIEN1Q9BRT3 115 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 MUC4Q99102 2169 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 LGALS1P09382 135 aaKnown RBP6.59□□□□□ -1.35
SNCA-206ENST00000420646 OR5AL1P0C617 328 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 LRRC75A-AS1Q8N1F1 130 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 C14orf178Q8N769 122 aaPredicted RBP6.59□□□□□ -1.35
SNCA-206ENST00000420646 OR11H1Q8NG94 326 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 C20orf144Q9BQM9 153 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 JPT2Q9H910 190 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 U3KQK5 164 aa6.59□□□□□ -1.35
SNCA-206ENST00000420646 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.36
SNCA-206ENST00000420646 OVOL1O14753 267 aa6.59□□□□□ -1.36
SNCA-206ENST00000420646 SRSF2Q01130 221 aaKnown RBP6.59□□□□□ -1.36
SNCA-206ENST00000420646 CNFNQ9BYD5 112 aa6.59□□□□□ -1.36
SNCA-206ENST00000420646 SNAI2O43623 268 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 TNFRSF6BO95407 300 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 HTN1P15515 57 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 ZNF747Q9BV97 191 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 ZNF580Q9UK33 172 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 CCL25O15444 150 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 IGLC3P0DOY3 106 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 SPINK13Q1W4C9 94 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 UBE2E2Q96LR5 201 aa6.58□□□□□ -1.36
SNCA-206ENST00000420646 K7EMT4 169 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 Q6ZN92 141 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 DNAJC9-AS1A6NH13 148 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 ELANEP08246 267 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 Q6ZSV7 163 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 PHLDA3Q9Y5J5 127 aa6.57□□□□□ -1.36
SNCA-206ENST00000420646 KNCNA6PVL3 124 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 RNASE3P12724 160 aaKnown RBP6.56□□□□□ -1.36
SNCA-206ENST00000420646 KLHL30-AS1Q8NEE0 82 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 DLX4Q92988 240 aaPredicted RBP6.56□□□□□ -1.36
SNCA-206ENST00000420646 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 YAE1D1Q9NRH1 226 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 TRAV9-2A0A087WT02 112 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 CBY3A6NI87 242 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 MYOZ3Q8TDC0 251 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 RPL39LQ96EH5 51 aaKnown RBP6.56□□□□□ -1.36
SNCA-206ENST00000420646 LEPP41159 167 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 KRTAP1-1Q07627 177 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 NEGR1Q7Z3B1 354 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 MDFICQ9P1T7 246 aa6.56□□□□□ -1.36
SNCA-206ENST00000420646 A0A087WWL8 130 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 K7EQG2 157 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 CRXO43186 299 aaPredicted RBP6.55□□□□□ -1.36
SNCA-206ENST00000420646 MGPP08493 103 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 CD7P09564 240 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 ID1P41134 155 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 HSPB8Q9UJY1 196 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 ASIPP42127 132 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 CACNG7P62955 275 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 STPG4Q8N801 248 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 OR2K2Q8NGT1 345 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 MAP1LC3AQ9H492 121 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
SNCA-206ENST00000420646 NSD1Q96L73 2696 aaPredicted RBP6.55□□□□□ -1.36
SNCA-206ENST00000420646 A0A0J9YX75 114 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 C20orf202A1L168 122 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
SNCA-206ENST00000420646 APRG1Q8IVJ8 170 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 NRACQ8N912 160 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 DPF1Q92782 380 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 LENEPQ9Y5L5 61 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 KLLNB2CW77 178 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 HBDP02042 147 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 DEFB131AP59861 70 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 FAM159AQ6UWV7 190 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 OR1N2Q8NGR9 330 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 DKK2Q9UBU2 259 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 CD28P10747 220 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 CDKN1BP46527 198 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
SNCA-206ENST00000420646 SMIM15Q7Z3B0 74 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 ERASQ7Z444 233 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 TMEM158Q8WZ71 300 aa6.54□□□□□ -1.36
SNCA-206ENST00000420646 HNRNPA3P51991 378 aaKnown RBP6.53□□□□□ -1.36
SNCA-206ENST00000420646 FAM74A4Q5TZK3 123 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 UQCR10Q9UDW1 63 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 TMEM89A2RUT3 159 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 LINC01619G3V211 115 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 RBMY1A1P0DJD3 496 aaKnown RBP6.53□□□□□ -1.36
SNCA-206ENST00000420646 RBMY1CP0DJD4 496 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 TSPOP30536 169 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 RBMY1FQ15415 496 aaKnown RBP6.53□□□□□ -1.36
SNCA-206ENST00000420646 Q8N1Y9 231 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 Q8N2B8 174 aa6.53□□□□□ -1.36
SNCA-206ENST00000420646 LINC01545Q5VT33 79 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 PET117Q6UWS5 81 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 RNF152Q8N8N0 203 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 OR9G4Q8NGQ1 327 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 RASL10AQ92737 203 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 IFI27L1Q96BM0 104 aa6.52□□□□□ -1.37
SNCA-206ENST00000420646 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms