RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 DNAH10OSP0CZ25 163 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 CFAP126Q5VTH2 177 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 PRNTQ86SH4 94 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 INO80EQ8NBZ0 244 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-206ENST00000420121 NDFIP1Q9BT67 221 aa7.47□□□□□ -1.21
SSBP3-206ENST00000420121 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 IGKV3D-20A0A0C4DH25 116 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 K7EQM0 130 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 TAAR5O14804 337 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 FUSP35637 526 aaKnown RBP eCLIP7.46□□□□□ -1.22
SSBP3-206ENST00000420121 TIRAPP58753 221 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 ZNF876PQ49A33 203 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 ZNF506Q5JVG8 444 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 SLC25A29Q8N8R3 303 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 PCNPQ8WW12 178 aaKnown RBP7.46□□□□□ -1.22
SSBP3-206ENST00000420121 PTH2Q96A98 100 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 TXNDC17Q9BRA2 123 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 LY96Q9Y6Y9 160 aa7.46□□□□□ -1.22
SSBP3-206ENST00000420121 BORCS7-ASMTA0A0B4J1R7 106 aa7.45□□□□□ -1.22
SSBP3-206ENST00000420121 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
SSBP3-206ENST00000420121 FBLL1A6NHQ2 334 aaKnown RBP7.45□□□□□ -1.22
SSBP3-206ENST00000420121 FAM74A7A6NL05 159 aa7.45□□□□□ -1.22
SSBP3-206ENST00000420121 FGF8P55075 233 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-206ENST00000420121 MAPKAPK5-AS1Q8N8E1 139 aa7.45□□□□□ -1.22
SSBP3-206ENST00000420121 ARL2-SNX15V9GYD0 113 aa7.45□□□□□ -1.22
SSBP3-206ENST00000420121 A0A087WTM6 91 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 K7EP13 123 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 CRIP1P50238 77 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 UBE2G2P60604 165 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 ZFP69Q49AA0 526 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 SAPCD1Q5SSQ6 148 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 Q86TA4 180 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 MSRB1Q9NZV6 116 aa7.44□□□□□ -1.22
SSBP3-206ENST00000420121 IGHV3-73A0A0B4J1V6 119 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 SMLR1H3BR10 107 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 PEX7O00628 323 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 ARPC5O15511 151 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 CIDEAO60543 219 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 NDUFA5Q16718 116 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 RGS21Q2M5E4 152 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 UFSP1Q6NVU6 142 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 Q6ZSN1 163 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 COX8CQ7Z4L0 72 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 NFE4Q86UQ8 179 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 Q8N1X5 172 aa7.43□□□□□ -1.22
SSBP3-206ENST00000420121 TRAV9-2A0A087WT02 112 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 CRYGDP07320 174 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 EVI2AP22794 236 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 FHITP49789 147 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 ERVFC1-1P60608 527 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 RHOHQ15669 191 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 LINC01556Q5JQF7 62 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 DNLZQ5SXM8 178 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 AKR1C8PQ5T2L2 129 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 SH2D6Q7Z4S9 175 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 NHLRC2Q8NBF2 726 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 ZC2HC1AQ96GY0 325 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 MAP1LC3BQ9GZQ8 125 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 PARLQ9H300 379 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 JPT2Q9H910 190 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 Q9UF83 564 aa7.42□□□□□ -1.22
SSBP3-206ENST00000420121 IGHV3-38A0A0C4DH36 116 aa7.41□□□□□ -1.22
SSBP3-206ENST00000420121 FABP5P3A8MUU1 101 aa7.41□□□□□ -1.22
SSBP3-206ENST00000420121 IFNA7P01567 189 aa7.41□□□□□ -1.22
SSBP3-206ENST00000420121 PIK3CD-AS1Q5SR53 167 aa7.41□□□□□ -1.22
SSBP3-206ENST00000420121 OR11H4Q8NGC9 324 aa7.41□□□□□ -1.22
SSBP3-206ENST00000420121 HIST1H2BAQ96A08 127 aa7.41□□□□□ -1.22
SSBP3-206ENST00000420121 NKX6-2Q9C056 277 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-206ENST00000420121 TRBV6-1A0A0K0K1D8 114 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 LRCOL1A6NCL2 159 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 IBA57-AS1B1ANH7 110 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 KRBOX1C9JBD0 128 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 SH2D1AO60880 128 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 PFDN1O60925 122 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 MGST1P10620 155 aaKnown RBP7.4□□□□□ -1.22
SSBP3-206ENST00000420121 PPT1P50897 306 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 XGP55808 180 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 ZNF345Q14585 488 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 KCNRGQ8N5I3 272 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 PRADC1Q9BSG0 188 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 SAMD10Q9BYL1 202 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
SSBP3-206ENST00000420121 VPS13BQ7Z7G8 4022 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 A8MWV9 139 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 B4DEV8 164 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 H3BVH4 76 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 ASIPP42127 132 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 KRTAP10-1P60331 282 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 SSTP61278 116 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 ZNF674Q2M3X9 581 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 LELP1Q5T871 98 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 Q8N3U1 123 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 C10orf126Q8N4M7 172 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 FMC1Q96HJ9 113 aa7.39□□□□□ -1.23
SSBP3-206ENST00000420121 GTSF1LQ9H1H1 148 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms