RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TMEM167BQ9NRX6 74 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 KLF12Q9Y4X4 402 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 LENEPQ9Y5L5 61 aa4.83□□□□□ -1.64
HMGN1-205ENST00000419378 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
HMGN1-205ENST00000419378 TRAV26-1A0A087WT03 109 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 TRGV1A0A0A0MS02 117 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 CTXND1A0A1B0GTU2 59 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 SERTM2A0A1B0GWG4 89 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 F6UZH7 168 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 TCRAP04437 139 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 RNF212Q495C1 297 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 AKR1C8PQ5T2L2 129 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 IQCF2Q8IXL9 164 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 KCNRGQ8N5I3 272 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 C5orf17Q8NAS9 161 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 OR11H4Q8NGC9 324 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 SGK494Q96LW2 274 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 C18orf15Q96N68 181 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 TNFRSF18Q9Y5U5 241 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 NACAE9PAV3 2078 aa4.82□□□□□ -1.64
HMGN1-205ENST00000419378 TRGV2A0A075B6R0 118 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 A0A1W2PRE2 83 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 SPINK4O60575 86 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 OR5I1Q13606 314 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 GAGE2EQ4V326 116 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 NDFIP1Q9BT67 221 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 TREM1Q9NP99 234 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 MRPL16Q9NX20 251 aaKnown RBP4.81□□□□□ -1.64
HMGN1-205ENST00000419378 GAGE2DQ9UEU5 116 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 NAGKQ9UJ70 344 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 DNAH11Q96DT5 4516 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 MUC4Q99102 2169 aa4.81□□□□□ -1.64
HMGN1-205ENST00000419378 IGLV2-18A0A075B6J9 118 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 TRAV21A0A0B4J279 112 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 A0A0J9YY99 117 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 KANTRA0A1W2PQU2 76 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 MAP1LC3B2A6NCE7 125 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 HMSDA8MTL9 139 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 K7EQM0 130 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 M0R2N4 97 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 BCL2L11O43521 198 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 IGLV2-11P01706 119 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 FGF8P55075 233 aaPredicted RBP4.8□□□□□ -1.64
HMGN1-205ENST00000419378 UBE2G2P60604 165 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 TMEM183BQ1AE95 376 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 LGALS9BQ3B8N2 356 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 TDRG1Q3Y452 100 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 FAM159AQ6UWV7 190 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 TMEM183AQ8IXX5 376 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 TMEM75Q8N9X5 138 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 ATG101Q9BSB4 218 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 MAP1LC3BQ9GZQ8 125 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 EPDR1Q9UM22 224 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
HMGN1-205ENST00000419378 PKD1P98161 4303 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 A0A0D9SG52 128 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 FBLL1A6NHQ2 334 aaKnown RBP4.79□□□□□ -1.64
HMGN1-205ENST00000419378 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 H3BNG1 76 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 IGHV3-53P01767 116 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 TYMSP04818 313 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 FHITP49789 147 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 ZNF80P51504 273 aaPredicted RBP4.79□□□□□ -1.64
HMGN1-205ENST00000419378 CCL18P55774 89 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 FLI1Q01543 452 aaPredicted RBP4.79□□□□□ -1.64
HMGN1-205ENST00000419378 ZFP69Q49AA0 526 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 Q6ZR54 194 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 VSIG2Q96IQ7 327 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 SPXQ9BT56 116 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 ZNF471Q9BX82 626 aaPredicted RBP4.79□□□□□ -1.64
HMGN1-205ENST00000419378 LINC00588Q9Y4M8 146 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 HERC2O95714 4834 aa4.79□□□□□ -1.64
HMGN1-205ENST00000419378 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 IGHV3-16A0A0C4DH30 117 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 UMAD1C9J7I0 102 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 PEX7O00628 323 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 GNRH2O43555 120 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 PFDN1O60925 122 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 GCGP01275 180 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 IFNA7P01567 189 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 PFN1P07737 140 aaKnown RBP4.78□□□□□ -1.64
HMGN1-205ENST00000419378 SEC11BP0C7V7 166 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 SMUG1Q53HV7 270 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 SAPCD1Q5SSQ6 148 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 Q86TA4 180 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 ZNRF2Q8NHG8 242 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 STOML3Q8TAV4 291 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 FAM213BQ8TBF2 198 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 RASL10AQ92737 203 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 LINC00479Q96M42 142 aa4.78□□□□□ -1.64
HMGN1-205ENST00000419378 NKX6-2Q9C056 277 aaPredicted RBP4.78□□□□□ -1.64
HMGN1-205ENST00000419378 SDF2L1Q9HCN8 221 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms