RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 RASL10AQ92737 203 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 GNRH2O43555 120 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 SRD5A1P18405 259 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 LY6EQ16553 131 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 WFDC12Q8WWY7 111 aa11.53□□□□□ -0.56
SEMA3B-203ENST00000419007 TRAV21A0A0B4J279 112 aa11.52□□□□□ -0.56
SEMA3B-203ENST00000419007 E9PLD3 99 aa11.52□□□□□ -0.56
SEMA3B-203ENST00000419007 ETDBQ3ZM63 59 aa11.52□□□□□ -0.56
SEMA3B-203ENST00000419007 FOXI2Q6ZQN5 318 aa11.52□□□□□ -0.56
SEMA3B-203ENST00000419007 SH2D6Q7Z4S9 175 aa11.52□□□□□ -0.56
SEMA3B-203ENST00000419007 PRB1P04280 392 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 EMP1P54849 157 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 C2orf66Q6UXQ4 117 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 GTSF1LQ9H1H1 148 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 DPH3P1Q9H4G8 78 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 U3KQE9 123 aa11.52□□□□□ -0.57
SEMA3B-203ENST00000419007 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
SEMA3B-203ENST00000419007 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
SEMA3B-203ENST00000419007 ZFAND2AQ8N6M9 145 aa11.51□□□□□ -0.57
SEMA3B-203ENST00000419007 SORL1Q92673 2214 aa11.51□□□□□ -0.57
SEMA3B-203ENST00000419007 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
SEMA3B-203ENST00000419007 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
SEMA3B-203ENST00000419007 USP9XQ93008 2570 aaPredicted RBP11.5□□□□□ -0.57
SEMA3B-203ENST00000419007 LMO4P61968 165 aa11.5□□□□□ -0.57
SEMA3B-203ENST00000419007 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
SEMA3B-203ENST00000419007 UTP20O75691 2785 aaKnown RBP11.5□□□□□ -0.57
SEMA3B-203ENST00000419007 PRADC1Q9BSG0 188 aa11.5□□□□□ -0.57
SEMA3B-203ENST00000419007 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
SEMA3B-203ENST00000419007 DOPEY2Q9Y3R5 2298 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 CD300EQ496F6 205 aaPredicted RBP11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 TOMM6Q96B49 74 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 PF4V1P10720 104 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 SMAGPQ0VAQ4 97 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 TAL2Q16559 108 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 GPHB5Q86YW7 130 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 ITLN2Q8WWU7 325 aaPredicted RBP11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 BAALCQ8WXS3 180 aa11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
SEMA3B-203ENST00000419007 TRAV12-1A0A0B4J245 112 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 NEXN-AS1Q8NBZ9 246 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 F5H697 171 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 RRN3P1Q2M238 152 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 GAGE13Q4V321 117 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
SEMA3B-203ENST00000419007 TRBV7-3A0A075B6L6 115 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 F8W1H4 67 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 OVOL1O14753 267 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 SLC25A16P16260 332 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 C20orf78Q9BR46 151 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 MRPL16Q9NX20 251 aaKnown RBP11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 CRYBG3Q68DQ2 2970 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 VPS13CQ709C8 3753 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 HOXA3O43365 443 aaPredicted RBP11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 SPANXB1Q9NS25 103 aaPredicted RBP11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 PGPEP1Q9NXJ5 209 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 ABCA2Q9BZC7 2435 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 NDUFS8O00217 210 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 JPT2Q9H910 190 aa11.47□□□□□ -0.57
SEMA3B-203ENST00000419007 J3QR89 54 aa11.46□□□□□ -0.57
SEMA3B-203ENST00000419007 AZU1P20160 251 aa11.46□□□□□ -0.57
SEMA3B-203ENST00000419007 GNLYP22749 145 aa11.46□□□□□ -0.57
SEMA3B-203ENST00000419007 A0A087WWL8 130 aa11.46□□□□□ -0.58
SEMA3B-203ENST00000419007 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.58
SEMA3B-203ENST00000419007 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.58
SEMA3B-203ENST00000419007 MUC4Q99102 2169 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 PLEKHB2Q96CS7 222 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 APOMO95445 188 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 NDUFA4O00483 81 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 RNASE3P12724 160 aaKnown RBP11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 FAM74A4Q5TZK3 123 aa11.45□□□□□ -0.58
SEMA3B-203ENST00000419007 SIGMAR1Q99720 223 aa11.44□□□□□ -0.58
SEMA3B-203ENST00000419007 TP53TG1Q9Y2A0 90 aa11.44□□□□□ -0.58
SEMA3B-203ENST00000419007 LINC01549A6NIU2 74 aa11.44□□□□□ -0.58
SEMA3B-203ENST00000419007 IGKV3-20P01619 116 aa11.44□□□□□ -0.58
SEMA3B-203ENST00000419007 GAGE12HA6NDE8 117 aa11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 INSL3P51460 131 aa11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 BLCAPP62952 87 aa11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 FAM159AQ6UWV7 190 aa11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 H3BUX3 64 aa11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 EDN2P20800 178 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms